KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101977934
Entry
101977934         CDS       T10664                                 
Symbol
Kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:iti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:iti03036]
    101977934 (Kdm4b)
Enzymes [BR:iti01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     101977934 (Kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     101977934 (Kdm4b)
Chromosome and associated proteins [BR:iti03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101977934 (Kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN DUF7141 PHD LBR_tudor SLX1_C
Other DBs
NCBI-GeneID: 101977934
NCBI-ProteinID: XP_005332118
UniProt: A0A287CYE8
LinkDB
Position
Unknown
AA seq 1107 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSDKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLPVLDHTRPTALSSPELSSWSA
SRASLKAKLLRRQISVKENRPWRKTEEERRPSLERRKEQTRKPGPASHRKRTQPKKPKAE
DPKSPEEGAAAALLEEAGGCVKEEATQEADPEEEEEELQPPQGLLQDAEGTEEDGRGKLR
PGKAKSDRKKKSHGPLSPQLPPPPAAPLPAEDALRLPPALEPPVLLPGSAASEESPPPAP
LNVVLPEAPGEEHEARPRPIIPMLYVVPRASTAGPDKDLAPGPQAAPMELTGPEEDTRGH
AGAVQVPASFPKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEESLPFSGEEDMSDPE
ALRSLLSLQWKNKAASFQAERKFNATAARTEPYCAICTLFYPYSQSLQMEKEAPPASVGE
GPSASPPSKSGQKTRPLIPEMCFTSSGGNTEPLPASSCVDDEGTSPLIACAKCCLQVHAS
CYGVRPELVKDGWTCSRCTAHAWTAECCLCNLRGGALQTTTDSRWIHVICAIAVPEVRFL
NVAERQPVDVGGIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVLM
EPDDWPYVVSITCLKHKSGGHAVQLLRAVSLGQVVITKNRNGLYYRCRVIGSTTQTFYEV
NFDDGSYSDNLYPESITSRDCLRLGPPPEGELVELRWTDGNLYKAKFISSITSHIYQVEF
EDGSQLTVKRADLFTLEEELPKRVRSRLSLSTGAPQGPAFSAEEVKAAKRPRVGTPLTAT
EDPGRSPDYLAFVESLLQARGRPGAPF
NT seq 3324 nt   +upstreamnt  +downstreamnt
atgggctctgaggaccacggggcccagaaccccagctgcaaaatcatgacgttccgcccg
accatggaggagtttaaggacttcaacaaatacgtggcctacatagaatcgcagggagcc
caccgggcaggcctggccaagatcatccccccgaaggagtggaagcccaggcagacctac
gatgacatcgacgacgtggtgatccccgcccccatccagcaggtggtgaccgggcagtcg
ggcctcttcacgcagtacaacatccagaagaaggccatgaccgtgggggagtaccgccgc
ctggccaacagcgacaagtactgcactccgcggcaccaggacttcgacgacctggagcgc
aagtactggaagaacctcaccttcgtctctcccatctacggggcggacatcagtggctct
ttgtacgatgacgacgtggcgcagtggaacatcgggagcctcaggaccatcctggacatg
gtggagcgcgagtgcggcaccatcatcgagggcgtgaacacgccctacctgtacttcggc
atgtggaagaccaccttcgcctggcacacggaggacatggacctgtacagcatcaactac
ctgcacttcggggagcccaagtcctggtatgccatcccgccggagcacggcaagcgcctg
gagcggctggccatcggattcttccccgggagctctcagggctgcgacgccttcctgcgg
cacaagatgacgctcatctcgcccatcatcctgaagaagtacggcatccccttcagccgg
atcacgcaggaggccggcgagttcatgatcacgttcccctacggctaccacgcgggcttc
aaccacggcttcaactgcgcagagtccaccaactttgccaccctgcggtggattgattac
ggcaaagttgccactcagtgcacctgccgcaaggacatggtgaagatctccatggacgtg
ttcgtgcgcatcctgcagcccgagcgctacgagctctggaagcagggcaaggacctgccg
gtgctggaccacacgcggcccacggccctgagcagccccgagctcagctcctggagcgcc
tcccgcgcctcgctcaaggccaagctcctccgcagacaaattagtgtgaaggaaaacaga
ccctggagaaagactgaggaggagaggaggccgagtctagagaggaggaaagagcagacc
aggaagccggggccggcgtcgcaccggaagcggactcagcccaagaagcccaaggctgaa
gaccccaaatctccagaggagggagctgcggcagcccttctggaggaggctggaggctgc
gtgaaggaggaggccacacaggaggctgacccggaggaggaggaagaagagctgcagccg
ccccagggccttctgcaggatgccgagggcaccgaagaggacgggcggggcaagctgcgg
ccaggcaaggccaagagcgaccgcaagaagaagagccacggccccctctcgccccagctg
ccgccaccccccgcagccccactccccgccgaggacgccctgcggctgccgcccgcgctg
gagcccccggtgctgctcccaggctctgcggcctcggaggagagcccgccgcccgcaccc
ctcaacgtggtgctccccgaggcgcccggcgaggagcacgaggcccggccgcggcccatc
atccccatgctctacgtggtgccccgggccagcacggccgggcctgacaaggacctggcg
cccggcccgcaggccgcccccatggagctgacgggccccgaggaggacaccaggggccac
gccggggcggtgcaggtaccagcgtcctttcccaaattaaagatggagatcaagaagagc
cggcgccaccccctgggcagaccacccacccggtccccgctgtctgtggtcaagcaggag
gcctcaagtgacgaggaatccctgcctttctccggggaggaggacatgagtgaccccgag
gccttgaggtccctgctgtccctgcagtggaagaacaaggcagccagcttccaggccgag
cgcaagttcaatgccacagccgcccggactgagccctactgcgccatctgcaccctcttc
tacccctacagccagtccctgcagatggagaaggaggccccgccagcctctgttggggag
ggcccctccgcctcgccaccttccaaaagcggccagaagactcggcctctgatcccagag
atgtgcttcacctccagtgggggcaacactgagccgctgcccgccagctcctgtgtggac
gacgaggggaccagcccgctgatcgcctgtgccaagtgctgcctgcaggtccatgccagt
tgctatggcgtccgccccgagctggtcaaggacggctggacgtgctcccggtgcacagcg
catgcctggactgcggagtgctgcctgtgtaacctccgggggggagcactgcagaccacc
accgacagcaggtggatccacgtcatctgtgccatcgccgtccccgaggtgcggttcttg
aatgtggccgagcgccagcctgtcgacgtggggggcattcccgagcagcggtggaagctg
aaatgtgtgtactgccgcaagaggatgaagaaggtgtcgggggcctgcatccagtgctcc
tacgagcactgctccacgtccttccacgtgacctgtgcccacgccgccggggtcctcatg
gagccggacgactggccctatgtggtgtccatcacctgcctcaagcacaagtctggggga
cacgctgtccagctcctgagggccgtgtccttaggccaggtggtcatcaccaagaaccgc
aacgggctctactaccgctgccgcgtcatcggcagcaccacgcagaccttctacgaagtg
aacttcgatgacggctcctacagtgacaacctgtaccccgagagcatcactagtagagac
tgcttgcggctggggccccctcccgagggcgagttggtggagctccggtggacggacggc
aacctctacaaggccaagttcatctcctccattaccagtcacatctatcaggtggagttt
gaggacggctcccagctgaccgtgaagcgtgcggacctcttcaccctggaggaggagctc
cccaagagggtgcgctcgcggctgtcgctcagcaccggggcgccgcagggacctgccttc
tcggccgaggaggtgaaggccgccaaacgcccgcgggtgggcaccccgctcaccgccacc
gaggaccccgggcgcagcccagactacctggccttcgtggagagcctgctgcaggcgcgg
ggccggcccggggcccccttctag

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