KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978201
Entry
101978201         CDS       T10664                                 
Name
(RefSeq) PH-interacting protein
  KO
K11797  PH-interacting protein
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:iti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:iti04121]
    101978201
Ubiquitin system [BR:iti04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101978201
SSDB
Motif
Pfam: WD40 Bromodomain WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_DCAF12 WbmS-like
Other DBs
NCBI-GeneID: 101978201
NCBI-ProteinID: XP_021581738
LinkDB
Position
Unknown
AA seq 1651 aa
MKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMA
VNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGAD
GTICFWLWDAGTLKINPRPAKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGS
GQPEKISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIWQFKRREWKSILLDMATRPAG
QNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVL
EPHPFDPRVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACT
DSHGHLLIFGFGSSSKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPHLMPPPFLVD
VDGNPHPSRYQRLVPGRENCREEQLIPQMGVTSSGLNQVLSQQANQEISPLDSMIQRLQQ
EQDLRRSGEAGIGNTSRLSRGSVSSTSEVHSPPNVGLRRSGQIEGVRQMHSNAPRSEIAT
ERDLVAWSRRVVVPELSAGVASRQEEWRTAKGEEEIKTYRSEEKRKHLTVAKENKILSVS
KNHAHEHLLDLGESKKQQANQHNYRTRSALEETPRPLEEIENGTSSSDEGEVVAVSGGTS
EEEERAWHSDGSSSDYSSDYSDWTADAGINLQPPKKVPKHKTKKAESSSDDEEESEKQKQ
KHIKKEKKKVNEEKDGATSPKKKKPKERKQKRLAVGELTENGLTLEEWLPSTWITDTIPR
RCPFVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPWHKMELREQELMKIVGIKYE
VGLPTLCCLKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRF
RSVIDDAWWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEE
LGTSVPLTDVECRSLIYKPLDGEWGTNTRDEECERIVAGINQLMTLDIASAFVAPVDLQA
YPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFV
TDLLLHFVKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADVPGTSTRKRKDHQPRRRLRNR
AQSYDIQAWKKQCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEA
GNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFH
KRNTITKRRKKRNRSSSISSSAASSPERKKRIVKPQLKSEISTSPFSTPTRSVPPRHNAA
QINGKTESSSVVRTRSNRVIIDPVITTEQPSTSSAAKNFIPKANTSAVPGKTILENSVKH
SKTLNTLSSPGQSTFSPGTRNNTAKENVEREKPIKRKMKSSVLSKASTLSKSSSVTEQGD
CKNNALVSGTIQVNGHGGQPSKLVKRGPGRKPKVEVNTNSGEIIHKKRGRKPKKLQYAKA
ENSEQNNMHPIRDEVVPSSTCNFLSESNMVKEDLLQKKSRGGRKPKRKMKTQKLDSDLLV
PANVKTLRRSNRKKTDDPVIDEEEEFEELKSSEPHMRTRNQGRRTAFYNEDDSEEEQRQL
LFEDTSLTFGTSSRGRVRKLTEKAKANLIGW
NT seq 4956 nt   +upstreamnt  +downstreamnt
atgaagatgcataaacgaattcttggacacttgtcatctgtgtactgtgtaacttttgac
cgtactggcagacgtatatttactggttctgatgattgccttgtgaaaatctgggcaaca
gatgatgggagattattagctactttaagaggacatgctgctgaaatatcagacatggct
gtaaactatgagaataccatgatagcagctggaagttgtgataaaatgatccgagtctgg
tgccttcgaacctgtgcacctttggcagttcttcagggtcacagtgcatctattacatca
ctacagttctcaccattgtgcagtggctcaaaaagatatctatcttctactggagcagat
ggcactatttgtttttggctctgggatgctggaactcttaaaataaacccaagacctgca
aaatttacagagcgccctcgacctggagttcaaatgatctgttcttcttttagtgctggt
ggaatgtttctggccacagggagcacagatcatattattagagtttatttttttggatca
ggtcagccagagaaaatatcagaattggagtttcatactgacaaagttgacagtatccag
ttttccaacactagtaacaggtttgtaagtggtagtcgggatgggacagcacgtatttgg
cagtttaaacgaagagaatggaagagcattttgttggatatggcaactcgtccagcaggc
caaaatcttcaaggaatagaagataagatcacaaaaatgaaagtaactatggttgcttgg
gatcgacatgacaatacagttataactgcagttaataatatgactctgaaagtttggaat
tcttacactggtcaacttatccatgtcctgatgggtcatgaagatgaggtatttgttctt
gagccacatccatttgatcctagagttctcttttctgctggtcatgacggaaatgtgata
gtgtgggatctagcaagaggagtcaaaattcgatcttatttcaatatgattgaaggccaa
ggacatggtgcagtatttgactgcaaatgctctcctgatggtcagcattttgcatgcaca
gactctcacggacatcttttaatttttggctttgggtccagtagcaaatatgacaagata
gcagatcagatgttctttcatagtgattaccggcctcttatccgtgatgccaacaatttt
gtattagatgaacagactcagcaggcaccccatctcatgcctccaccatttttggttgat
gttgatggtaaccctcatccatcaagatatcaaagattagttcctggtcgtgaaaactgt
agagaggagcagctcatcccgcagatgggggtcacttcctcaggattaaaccaagtttta
agtcagcaagcaaaccaggaaatcagtcccctggatagcatgattcaaagactacaacaa
gaacaagacctcagacgttctggtgaagcaggtattggtaacaccagtcgcttaagtaga
ggatctgtaagttctacctcagaggttcattcaccaccaaatgtaggactaagacgtagt
ggacaaattgaaggtgtacggcaaatgcatagcaatgcaccaaggagtgagatagccaca
gagcgggatcttgtagcatggagtcgaagggtggtagtacctgagctgtcagctggtgtt
gccagtcggcaggaagaatggcggactgcaaagggagaagaagaaataaagacttatagg
tcagaagaaaaaaggaaacacttaactgttgcaaaagagaataaaatacttagtgtttca
aagaatcatgctcatgagcatctcttggatcttggagaatccaaaaagcaacaagcaaat
caacataattatcgtacaagatctgcactggaagaaactcctagaccattggaggagata
gaaaatggcactagttcttcagatgaaggtgaagtggttgctgtcagtggtggaacttct
gaagaagaagagagagcatggcacagtgatggcagttctagtgactactccagtgattat
tctgactggacagcagatgcaggaataaatttacaaccaccaaagaaagttcccaagcat
aaaaccaagaaagcagaaagcagttcagatgatgaagaggaatcagaaaaacagaagcaa
aaacatattaaaaaggaaaagaaaaaagtaaatgaagaaaaagatggagcaacatcacca
aagaaaaagaaacccaaagaaagaaaacaaaagagattggctgtgggagaactaactgaa
aatggtttgacattagaagaatggttaccatcaacatggattacagatactattccccga
agatgtccgtttgtgccacagatgggtgatgaggtttattatttccgacaaggacatgaa
gcatatgttgaaatggcccggaaaaataaaatttatagtatcaatcctaaaaaacaacca
tggcataaaatggaactacgggaacaagaactgatgaaaatagttggcataaaatatgaa
gtgggattacctaccctttgctgccttaaacttgcttttctggatcctgatactggtaaa
ctgactggtggatcatttaccatgaaataccacgatatgcctgatgttatagatttccta
gtcttgagacaacaatttgatgatgccaaatataggcggtggaacataggtgaccgtttc
agatcagtcatagatgatgcttggtggtttggaacaattgaaagccaggaacctcttcag
cctgagtaccctgatagtttgtttcagtgctataatgtttgctgggacaatggagataca
gaaaagatgagtccttgggatatggagcttatacctaataatgctgtatttccggaagaa
ctaggtaccagtgttcccttaactgatgttgaatgcagatcattaatctataaacctctt
gatggagaatggggtacgaataccagggatgaagaatgtgaaagaattgttgcaggaata
aaccagttgatgacactagatattgcttcagcatttgtggcccctgtggatctgcaagct
tatcccatgtactgcactgtagtggcatatccaacggatctaagtacaattaaacaaaga
ctggaaaacaggttttacaggcgagtttcttccctgatgtgggaagttcgatatatagag
cataacacacgaacatttaatgagccgggaagcccaattgtgaaatctgccaaatttgtg
actgatcttcttctacattttgtaaaggatcaaacttgttataacataattccactttat
aattcaatgaagaagaaggttttgtctgactctgaggaagaagagaaagatgctgatgtg
ccaggaacttctacccgaaaaaggaaggaccatcagcctagaagaagattacgtaacaga
gctcagtcttatgatattcaagcatggaagaaacaatgtcaggaattgttaaatctcata
tttcagtgtgaagattcagagccttttagacagccagtagatctccttgaatatccagac
tacagggacatcatcgacactccaatggattttgctactgttagagaaaccttagaagct
gggaattatgagtcaccaatggagttatgtaaagatgtcagacttatttttagtaattcc
aaagcgtatacaccaagcaaaagatcaaggatttacagcatgagtttgcgcctgtctgct
ttctttgaagaacatattagttcagttttatcagattataaatctgctctgcgttttcat
aaaagaaatactataaccaagaggaggaagaaaagaaacagaagtagttctatttccagt
agtgccgcatcaagccctgaaaggaagaaaaggattgtaaaaccccagttaaagtcagaa
atctctacctctccattctctacacctacacgatcagtaccaccaaggcataatgctgct
cagataaatggtaaaacagaatccagttctgtggttcgaaccagaagcaaccgagtaatt
atagatccagttatcactactgagcaaccatctacttcatcagctgcaaagaattttatt
ccaaaagctaatacatctgcagtgccagggaaaacaatactagaaaattctgtgaaacat
tccaaaaccttgaatactctttcgagtcctggtcaatccacttttagtcctggcactagg
aataatactgcaaaagaaaacgtggaaagggaaaaacccatcaaacgtaaaatgaaatca
tctgtactctcaaaggcatccactctttcaaagtcatcatctgtcactgagcaaggagat
tgtaagaacaatgctcttgtatcaggaactattcaagtaaatggccatggaggacagcca
tcaaaacttgtgaagaggggacctggaaggaaacctaaggtagaagttaataccaatagt
ggtgaaattatacacaagaaaaggggtagaaagcccaaaaagctacagtacgcaaaggca
gaaaattcagagcaaaataacatgcatcccatcagagatgaagtggttccttcttcaaca
tgcaattttctttctgaaagtaatatggttaaggaggatttgttacagaaaaagagtcgt
ggaggcagaaaacccaaaaggaagatgaaaacacaaaaactagattcagatcttttagtt
cctgcaaatgttaaaacgctaaggagaagtaacagaaaaaagactgatgatcctgttata
gatgaagaagaagagtttgaagaactcaaaagctctgaaccccacatgagaactagaaac
caaggtcgaaggacagctttctataatgaggatgactcggaagaggagcaaaggcagctg
ttgtttgaagacacctctttgacttttggaacttctagtagaggacgagtccgaaagttg
actgaaaaagcaaaagcaaatttaattggttggtaa

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