Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978345
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Entry
101978345 CDS
T10664
Symbol
Hmgcll1
Name
(RefSeq) 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X2
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00280
Valine, leucine and isoleucine degradation
iti00650
Butanoate metabolism
iti01100
Metabolic pathways
iti04146
Peroxisome
Module
iti_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
101978345 (Hmgcll1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101978345 (Hmgcll1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101978345 (Hmgcll1)
Enzymes [BR:
iti01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
101978345 (Hmgcll1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
PRA-PH
Motif
Other DBs
NCBI-GeneID:
101978345
NCBI-ProteinID:
XP_005318600
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All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MGNVPSAVKHCLSYQQLLREHLWIGDSVAGALDSAQESSQLSGLPEYVKIVEVGPRDGLQ
NEKVIVPTDIKIEFINRLSQTGLSVIEVTSFVSSKWVPQMADHTEVMKGINQYPGVRYPV
LTPNLQGFHRAVAAGATEISVFGAASESFSKKNINCSIEESMGKFEEVVKSARHMNIPIR
GYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEVSLGDTIGVGTPGSMKRMLESVMKEI
PPGALAVHCHDTYGQALANILTALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYML
NGLGLNTGVDLYKVMEAGDFICKAVHKNTNSKVAQASFSA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgtgccatccgctgtgaagcactgcctcagctatcagcagcttctccgggag
catctctggatcggggattcagtggcaggggcactggactcggcgcaggaatcatcccag
ttatctgggctccctgaatatgttaaaatagtggaagttgggcctagggatggactgcag
aatgaaaaggttatagttcctacagacataaaaattgaatttatcaatcgactttcccaa
actggcttgtctgtaatagaagtaaccagctttgtgtcctccaaatgggtgccacagatg
gctgatcacactgaagtgatgaaaggcattaatcaatatccaggagttcgatatcctgtc
cttactcctaatcttcagggttttcaccgtgctgttgctgctggagccactgagatatca
gtttttggtgctgcatctgaatcctttagcaagaagaatattaattgttccattgaagaa
agtatgggaaagtttgaagaggtcgttaagtctgcaaggcacatgaatattccaattcga
gggtatgtgtcttgtgccttgggctgcccatacgaaggaagtattacaccgcaaaaagtc
acagaagtgtctaagagattgtatggcatgggttgttatgaggtttctctgggagacacc
attggagtggggactccaggaagcatgaagagaatgttggaaagtgtcatgaaagaaata
cctccaggtgctcttgctgttcactgtcatgacacttacggacaggccttagcaaatatc
ctcacggcccttcagatgggaattaacgtggtggactctgcagtgtcaggattaggtggc
tgcccttatgcaaaaggtgcttccgggaatgtagccactgaggatttgatatatatgctt
aatggcctggggctcaatacaggtgtggatctctacaaagtaatggaagctggtgacttt
atatgcaaagctgtgcataaaaatacaaactctaaagtagcacaagcctccttcagtgct
tga
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