Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978361
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Entry
101978361 CDS
T10664
Symbol
Ppfibp2
Name
(RefSeq) liprin-beta-2 isoform X13
KO
K27096
liprin-beta
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101978361 (Ppfibp2)
Membrane trafficking [BR:
iti04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101978361 (Ppfibp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Tropomyosin
DUF16
FxsA
Motif
Other DBs
NCBI-GeneID:
101978361
NCBI-ProteinID:
XP_021576387
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MAFDASHALEAALEQMDGIIAGTKTGADISDGTCEPGLSSPASYMNPLNLIEDLRLALEM
LELPQEREALLSQIPGPTATYIKEWFEESLSQANHHGAASNETYQERLARLEGDKESLIL
QVSVLTDQVEAQGEKIRDLEVCLEGHQVKLNAAEEMLQQELLSRTSLETQKLDLMTEVSE
LKLKLVGMEKEQREQEEKQRKAEELLQELKHLKIKVEELENERNQYEWKLKATKAEVAQL
QEQVALKDAEIERLHSQLSRTTALHSDHAERDQEIQRLKMGMETLLVANEDKDRRIEELT
GLLNQYRRVKEIVMATQGPSERTLSINEEELEGSFRKWNTVNKGTEEFKQEMPPRCSSPT
VGPPPLPQKSLESRVQKKLSCSLEDLRSESVDKCVNGKQLSLAVEPKDSSFLVEQKYPTL
PGKLSGATPNGEAAKSTSATSQPDPVGSNLLRLRDTESSWDNAAMANELSSNSPGAESSP
QSPLTPDGKRSPKGIKKFWGKIRRTQSGNFNTDAPGMAEFRRGGLRATAGPRLSRTRDSK
GQKSDANAPFAQWSTERVCSWLEDFGLAQYVIFARQWVTSGHTLLTATPQDMEKELGIKH
PLHRKKLVLAVKAINTKQEEKSALLDHIWVTRWLDDIGLPQYKDQFHESRVDGRMLQYLT
VNDLLFLKVTSQLHHLSIKCAIHVLHVNKFNPHCLHRRPADESNLSPSEVVQWSNHRVME
WLRSVDLAEYAPNLRGSGVHGGLIILEPRFTGDTLAMLLNIPPQKTLLRRHLTTKFSALI
GPEAEQEKRDKMASPAYTPLTTTAKVRPRKLGFSHFGNIRKKKFDESTDYICPMESNDAI
SDSHRVYSGCRGLSPLDAPELDELDQVGQMAPSEGTVTQIGLLSQDIHRLTTLLSQDQLL
NDSCLAAPNSDDWR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgatgctagtcatgccctggaagctgccttggagcagatggatgggatcatt
gcaggcactaaaacaggggcagatattagtgatggtacctgtgagcctggactgtcttcc
ccagcctcttacatgaaccccctcaatctcatcgaggacttgaggctggccctggagatg
ttggaacttcctcaggagagagaagccctcctgagccagatccctggcccaacagctacc
tacataaaagagtggtttgaggagagcttgtcccaggcaaatcaccatggtgctgctagt
aatgaaacctaccaggaacgcttggcacgtctagaaggagataaggagtccctcatatta
caggtgagcgttctcacagaccaagtggaagcccaaggagagaagattcgggacttagaa
gtgtgtctggaaggacaccaggtgaaactcaatgctgctgaagaaatgcttcaacaggag
ctgttaagtcgcacatctcttgagacccagaagcttgatctaatgactgaagtgtctgag
ctgaagctcaagctggttggcatggagaaggagcaaagagagcaagaggaaaagcagaga
aaagcagaggaattactacaagagctcaagcacctcaaaatcaaagtggaagagctggaa
aatgaacggaatcaatatgaatggaagctgaaggccactaaggccgaggtggcccagcta
caagagcaagtggctctgaaagatgcagaaattgagcgtctgcatagccagctctcccgg
accacagctcttcacagtgaccatgcagagagagatcaagaaattcaacgtctgaagatg
gggatggaaacactgcttgttgccaatgaagataaggaccgtcggatagaggagctcaca
gggctcttgaaccagtaccgaagggtgaaggagattgtgatggcaactcaagggccttca
gagagaactctctccatcaatgaagaagaactggagggaagttttagaaaatggaacact
gtaaataaaggcactgaagaatttaaacaagagatgcctccaagatgcagctctcccaca
gtggggccacctcctttgccacagaaatcactggaaagcagggttcagaaaaaactctcc
tgtagtctagaagatttaagaagtgaatctgtggataagtgtgtcaatgggaagcagctt
tctttggcagtagaacccaaggacagctctttcctggtggaacagaaatatcctacatta
cccgggaagctttcgggagccacacccaatggagaagctgccaaatctacttctgccacc
tcccagcctgaccctgtaggaagcaacctgctaagactgagagacacagaaagcagttgg
gataatgctgccatggccaacgaactctcttccaactcaccgggtgctgagtcaagcccc
cagtcccccctgacaccagatggtaaacggagccccaaaggaatcaagaaattctgggga
aaaatccgaagaactcagtcaggaaatttcaacactgatgcaccagggatggcagagttt
cgacgaggtgggcttcgggcaactgcaggaccaagactctctaggaccagagattctaag
ggacagaaaagtgatgccaatgccccctttgcccagtggagcacagagcgtgtatgttca
tggcttgaggacttcggcctggctcagtatgtgatctttgccaggcaatgggtgacatct
ggccacactttactgacagctacccctcaggacatggaaaaggaactaggaattaagcac
cctcttcatagaaagaaacttgttttagcagtgaaagccatcaacaccaagcaggaagag
aagtctgcgctgctggatcacatttgggtgacacggtggcttgatgatattggcttaccg
caatataaagaccagtttcatgagtccagagttgatggacgaatgctgcaatacctaact
gtgaatgatttactcttcttaaaagtcaccagccagctacatcatctcagcatcaaatgt
gccattcatgtgctgcatgtcaacaagttcaacccccactgcctgcatcggcgcccagct
gatgagagtaacctttctccttcagaagttgtgcaatggtccaaccacagggtgatggaa
tggttgcgatctgtggacctggcagagtatgcacccaaccttcgaggaagtggcgtccat
ggaggtcttattatcctggaaccacgcttcactggggataccctggccatgcttctcaat
atcccaccacagaagacgctcctcaggcgccacctgaccaccaaattcagtgccctgatt
ggtcctgaggctgaacaggaaaagcgagataaaatggcctcaccagcttatacaccactg
actaccacggccaaagtccggccaaggaaactgggattttcacattttggaaacataaga
aaaaagaagtttgatgaatccacagattacatttgcccaatggaatctaatgatgctatc
agtgatagtcaccgggtctacagtggctgccgaggcctcagcccccttgatgctcctgaa
ctggatgagttggaccaggtgggacagatggcgccttccgaaggtactgtgacgcagata
gggctcctctcccaagacattcatcgccttacgactcttttgagccaggaccagctgctg
aatgactcttgcctggctgcccccaactctgatgactggagatga
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