Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978401
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Entry
101978401 CDS
T10664
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101978401 (Chd6)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101978401 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
101978401
NCBI-ProteinID:
XP_013216022
UniProt:
I3MKX5
LinkDB
All DBs
Position
Unknown
AA seq
2719 aa
AA seq
DB search
MKMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDVASHRLPQKD
PYAAEDEVNTLFPRKMMSHNGMEDSGGGGTGVKKKRKKREPGEHEGAAKGSKDKEPKPKR
KREPKEPKEPRKAKEPKKAKEPKEPKQKDGAKKTRKPREASGTKEAKEKRSCADSAARTK
SKKASKEQGPTPVERKKKGKRKSETTVESLELDQGLPNTSLRSPEESTESADNQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQILPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTSAREL
DVPLPDIDYMEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGNSDIPERGSTDKEDNAEDKLDGLQKQTESSNDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVPSALTARLRRLVTVYQRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMD
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDENLEHYFY
SFVAMCRNVCRLPTWKDGGPPDATIYVEPITEERAARTLYRIELLRKIREQVLRCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKR
TDTQPPGSLCCLYQTNSKLYESLTYTQMSRTSESLESEPENLVKIEDRDDHLVLPGGNLP
DMTCENFISKVQDVISINHDESLLPESLDNMMYGKKVLSREAGSFQESPNTNMDSRKDAI
AISASRDGSCQPSGHETAITSGSSLMSSLEEGVAQMNIKSGKHLLISISKEGDPCCSETG
QRPESMGQLEAKCLASPALDAGNGSGLVDMCSLTVCDSKRNLSSDQQLIDLLENKSLESK
LILNQNQSDEDEEEEENEEETLVVATDTRERSEVLHLTEPAANIPREKSQGFPLEEAKKG
SLEIVRQTPGPQRSFPPAACQCHCKHMERWAHGLGSDEFEVEKPKAYNPDLYRSKASNTA
VEGEPTALPSEPFKVKHELLKEPWKESAEGKKSFSTYTPEGSEPKSEDMDFENKDDYDQD
GTCHSQDYPGKYSEEESKSSASGITGDLGEDPQETRAPTIAQLLQEKTLYSFSEWPKDRV
IINRLDNICHVVLKGKWPSSQQYEPSGTLPTPVLTSNAGSRNSLSEAEVAEHSFSNGAAL
AAQIQKESFLAPVFTKDEQKHRRPYEFEVDRDAKARSLDQFSATHGHPSIILNGWHGESA
IDLSCSSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIINGS
LRRDDAATRRRRGRRKHAEGGMDLIFLKEQTLQAGILEVHEDPGQATLSTTHSEGPGPVT
STPEPAATTNSQAEKAVPSKSLLDWLRQQADYSLDMPGFGANFSDKPKQRRPRCKEPGKL
DISSLSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGPRRRGRRPRSELLKAPAI
VADSPSGMGPLFMNGLIAGMDLVGLQNVRNMPGIPLTGLVGFPAGFATMPTGEEVKSTLS
MLPMMLPGMAAVPQMFGVGGLLNTPMATTCTSPAPASLSSTTKSGPSATEKTAEDKPSSH
DVKTDMVAEDKPGPSPFSDQSEPAITASSPVAFNPFLIPGVSPGLVYPSMFLSPGMGMAL
PAMQQARHSEIVGLESQKRKKKKTKGDTPNPNPEPAPGCEREPSSDQNYTESSTPLPPER
EHVAQAGEGGLKDSSNDTN
NT seq
8160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagaaaagcagttgtcaaatttaaaggttttgaatcac
tccccaatgtctgatgcctctgtcaattttgactacaaatctccatccccatttgactgc
agtactgatcaagaagagaaaattgaagatgttgccagccaccgtctgccccagaaggac
ccgtatgctgctgaagacgaagttaataccctttttcctagaaaaatgatgtcccataat
gggatggaggacagtggaggtggaggtacaggagtaaaaaagaaacggaaaaaaagggag
ccaggagagcatgagggtgcagcaaagggaagtaaggacaaggagcccaagccaaagagg
aagcgagaacctaaagagccaaaggaacccaggaaggccaaggaacctaagaaggccaag
gagcccaaggaacctaagcagaaggatggtgcaaagaagacgcggaaaccccgggaggcc
tcaggcaccaaggaggccaaagagaagcggagctgtgctgactctgcagccaggactaag
tccaagaaggccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaaa
aggaaaagtgaaaccacagtggagagcttagagctggatcagggcctgccgaacacatcc
ctgcggagtcctgaggagtccactgagtctgcagacaaccagaaacgacgctcaggacga
caagtaaaacgcagaaaatataacgaggacctggacttcaaagtggtggatgatgatggg
gaaacaatcgctgttcttggagctggccgaacatctgcactctcagcttctacactggct
tggcaagcagaggagcctccagaagatgatgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggttcacccaggagaacccccattcgacctagagctgttctacgtt
aagtatagaaatttttcctacttacattgtaaatgggccacaatggaagagctggaaaag
gatcctcgcattgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttacagagcctgatgaagacttgttcaatccagactatgtagaagtggatcgcatc
ttggaagtggctcacaccaaggatgcagagacaggggaggaggtgacacattacctggtg
aagtggtgctccctgccgtatgaagaaagcacttgggagctggaggaagatgtggatcct
gcaaaagttaaagaatttgagtctcttcaaattctccctgaaattaaacacgtggaacgg
cctgcttcagactcctggcagaaacttgagaaatctcgagaatataagaacagtaaccaa
cttcgggaataccagctagagggaatgaactggcttctttttaattggtataacagaaaa
aactgtattttggctgatgagatgggcctagggaaaaccatccagtccatcacattcctt
tcagaaatattcctcagaggaatccatggcccttttctcatcatcgctcctctctccacc
attactaactgggagcgggagttccgaacatggacagagatgaatgccattgtgtaccat
ggcagccagatcagcaggcagatgatccagcaatatgaaatggtgtacagagatgcacag
ggaaaccccctctcaggagtcttcaagttccacgttgtcatcacaacatttgagatgatc
ctggcagattgtccagagctgaagaagattcactggagctgtgtgataattgatgaggcc
caccggttgaagaataggaactgcaaacttctggaggggctaaagctcatggctctggaa
cataaagtgctgctcactggaacacctttgcagaactctgtggaagaactcttcagtttg
ctaaattttttggagccatcacaatttccttcagagactgctttcctggaagagtttgga
gatctgaaaacagaggaacaggtaaagaaactgcagtccatcctaaaaccaatgatgctt
cggcgcctgaaagatgatgtggaaaagaaccttgctcccaaacaagagacaatcattgaa
gtagaacttaccaatatccagaaaaagtactaccgtgccatcctggagaaaaacttttcc
ttcttgaccaagggagcaaatcagcacaacatgcccaatcttatcaacaccatgatggag
ctgagaaaatgctgtaaccatccctatctgatcaatggggcagaggaaaaaattttagag
gatttccgaaaaacccacagccctgatgcccctgattttcagctgcaggccatgattcag
gcagcagggaagctggtgctgattgataaactgctccctaagctaattgctggtggccac
aaagtgctcatcttctctcagatggtgcgctgcctggatatcctggaagattatctcatc
caaagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccaga
gcaggaggcctggggatcaatctcacagctgctgatacctgcatcatatttgattctgac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccgcataggccagagcaaa
gctgtcaaggtgtatcgcctcatcactcggaactcctatgagcgggaaatgtttgataag
gccagcctaaagctgggcctggacaaggctgtacttcaggacatcaacagaaagggcagc
accaatggagtacagcaactctcaaaaatggaggtggaggacttgctccggaaaggtgct
tatggagctttaatggacgaggaggatgaaggctccaaattttgtgaagaagatatagac
cagattcttcagaggagaacccacaccatcaccatccagtctgaggggaaagggtctact
tttgccaaggctagctttgtggcttcaggaaacagaacagatatttccttagatgatcct
aacttttggcagaaatgggctaaaatagctgaactagacactgaagcaaagaatgaaaag
gaaagcttagtgattgaccgacctcgtgtgagaaagcagacaaaacactacaactcattt
gaagaagatgagctcatggagttttcagagttagacagcgactcagatgaaaggcccact
cggtccaggcgcctcaatgacaaagccaggcgctacctccgagctgaatgcttccgagta
gagaagaacctgcttatctttggctggggccggtggaaagacattctgactcacgggcga
ttcaagtggcacctgaacgagaaggatatggagatgatttgccgggccctgctggtgtac
tgtgtcaaacattataagggggatgagaagatcaaaagtttcatttgggagctgatcaca
cctaccaaagatggacaggcccagaccctccagaaccattcagggttgtctgccccagtc
cccagagggaggaaagggaagaagacaaagaaccagttattgctcccagaactaaagaat
gcagactggttggctacctgcaaccctgaggtggtcttgcatgatgatggctataagaaa
cacctcaaacagcactgcaataaggtccttttgagagtaaggatgctatactacctaaaa
gctgaaatactgggagaagcagctgataaagcatttgagggaacttctgccagggaactg
gatgttcctctgcccgacattgactacatggagatcccagtggattggtgggatgctgag
gctgataagtcccttctcattggcgtgttcaaacatggttatgagagatacaatgccatg
agagcagacccagcactctgtttcctggagaaagttgggatgccagatgagaagtccctt
tctgcagaacagggtgttacggatggtaactcagacattcctgaaagaggcagcacagat
aaagaagacaatgctgaggacaaattagatggcctccagaaacaaacggaaagttccaat
gatggaggtgatggcatatttggtgaaaagaaggatgacagccgggcagcccaggatggc
tccgacccagacaaatcgccctggccagttccatctgctctcacagctcgtctccggcgt
ctggtcactgtataccagcgctgcaaccgcaaggagctctgccgacctgaaatcctggga
ccaggtaaccaaggatactgggttcaggaggaaatgttcaggagaacctcagaaatggac
ctcatcaacaaggaagcccagaagaggtggactagaagagaacaagcagatttctacaga
acagtatcttcctttggagtggtttatgatcaagaaaagaaaaccttcgattggacccag
ttccgcatcatttcccgtttggacaagaagtcagatgagaacttggaacactatttttac
agttttgtggccatgtgccgaaatgtctgtcgtctgcccacatggaaagatggtggtccc
cctgatgccaccatctatgttgaaccaatcacagaggaacgggctgcaaggactctgtac
cgcattgaactgttacggaagatccgtgagcaggtgctcaggtgtcctcagctgcacgag
cgccttcagctctgcaggcccagcctatacctcccagtctggtgggagtgtgggaaacat
gatcgagacctgctcattggcactgccaaacacgggctcaaccgcactgactattatatc
atgaatgacccgcagctgtccttcctggatgcctatagaaactatgcccagcataaaaga
actgatacccagccaccaggaagtctctgttgcctttaccagaccaactctaaactatat
gaatctcttacctatactcaaatgagtaggacttcagagtcacttgaaagtgaacccgag
aatctggtgaaaatagaagacagagatgatcatcttgttctgcctggaggcaacttacct
gatatgacttgtgaaaactttatttctaaagttcaagatgtcatttccatcaaccatgat
gaaagtctgctgcctgagtccttagataatatgatgtatggtaagaaggtgctcagccga
gaggcaggctcttttcaggagagcccaaataccaatatggactctagaaaagatgccatt
gccatctcggcaagcagagatgggagctgccagcctagtggccatgagacagcaataact
tcaggttcctctcttatgagtagcttagaagaaggagtagctcaaatgaacattaaaagt
ggaaaacatttgttgatatcgatttcaaaggaaggggatccctgctgcagtgaaacaggg
cagagacctgaaagcatggggcagctagaagctaaatgcttagcttcccctgccttagat
gcaggaaatggaagtgggcttgtagatatgtgcagtcttactgtctgtgactccaaaaga
aacctctcatcagatcaacaattaattgatttattagaaaacaaaagtttagaaagtaaa
ttgattctgaatcagaaccagagtgatgaagatgaagaagaagaggaaaatgaggaagaa
accttagtagtggcaacagacacaagagaaaggtcagaggttttacatctcactgagcct
gctgcaaatatcccaagggaaaagagccaaggcttccctctggaagaagccaagaaagga
agcctggagatagtacgccagactcctggaccacaaaggtcctttcctccagcagcctgt
cagtgccactgcaaacacatggagaggtgggcacatggccttgggagtgatgaatttgaa
gtggagaaacccaaggcttacaacccagacctatacagaagcaaagccagtaatactgca
gtggaaggtgagcccactgctcttccatcagagccgtttaaagtgaaacatgagctttta
aaagaaccttggaaagaaagtgcggagggtaaaaaaagtttctccacatatactcccgaa
gggagtgagcccaagtctgaagacatggattttgagaataaagatgattatgatcaagat
gggacctgccatagtcaagactacccagggaaatactctgaagaagaaagcaagagctcg
gcatcaggcatcacaggggaccttggggaagacccccaggagacccgagctcctaccatt
gctcagctcctgcaggaaaaaactctttattccttctcagagtggccaaaggatcgtgtg
ataattaaccgcctggataacatctgccatgtggtgttaaaggggaagtggccctccagc
cagcagtatgagccctcgggcacactgcccacccctgtcttaactagcaatgctggttct
cgaaatagcctctcagaggcagaggtggcagaacacagtttcagcaatggtgcagcattg
gcagcccagatccagaaggagagcttcttagctccagtattcacaaaagatgaacaaaag
cacagacgtccctatgagtttgaggtggacagggatgctaaggctcggagcctagaccag
ttctctgcgacccacgggcacccctccatcatcctcaatggctggcatggggagtcagct
atagatctctcctgctcatcagaggggtccccaggagccacatccccttttccagtgagt
gccagcacccctaagattggagctatcggttcacttcaaggagcccttggtatggacttg
tctggaatcctacaagctggcctgattcacccagtgactggacagatcatcaacggaagc
ctcagaagagacgatgctgccacaaggaggcgaagagggagacggaaacatgcagaagga
gggatggacctaatctttttgaaggagcaaacacttcaggcaggaatcttggaagtccat
gaagacccagggcaggccaccctaagcaccacacactctgaaggccccggacctgttacc
tctacccccgagcctgcagcaaccaccaacagccaggctgagaaagctgttcccagcaag
agtctgcttgactggctgcggcagcaggctgactactctttagacatgcctggctttggg
gcaaatttttcggacaaaccgaagcagaggaggccacgctgtaaagaacctggaaaatta
gacatcagctctctgagtggagaagagagggttcctgctgtccctaaggagccaggactg
aggggatttcttccagaaaacaaattcaatcacaccttggctgagcctgttcttcgggat
gcaggcccccgcaggagggggagacggccccggagtgaactcctgaaagctcccgccatt
gtggcagactctccctccggaatggggccactgttcatgaacgggttgattgcagggatg
gacctggtaggattgcagaacgtgaggaatatgccaggtatccccctcactgggctggtg
ggcttcccagctggctttgccaccatgcctacaggcgaagaggtcaagagcaccctgagc
atgctgcccatgatgctgccaggaatggccgcagtaccccagatgtttggtgttggagga
ctcctcaacacacccatggcaactacctgcacgtcccctgctccagcatctctctcaagc
acaacgaaaagtggcccatcagccactgaaaagactgcagaggataagccaagcagccat
gatgtaaaaactgacatggtagctgaagacaagcctggtcctagtccattttctgatcag
tctgaacccgcaataactgctagtagtcctgtggcttttaacccatttctcatcccagga
gtgtctcctggacttgtttacccatctatgtttctctccccaggcatgggcatggcttta
ccggccatgcagcaggccagacactctgaaatagttggtctagagagccagaagagaaag
aagaagaaaacaaaaggggacaccccaaaccccaacccagagcctgctcctgggtgtgaa
agggagcccagcagcgatcagaactacaccgagtccagtacccctttgcccccagagaga
gaacatgtggcacaggctggggaagggggactcaaagactccagcaacgacaccaattag
DBGET
integrated database retrieval system
