Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978422
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Entry
101978422 CDS
T10664
Symbol
Nrcam
Name
(RefSeq) neuronal cell adhesion molecule
KO
K06756
neuronal cell adhesion molecule
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101978422 (Nrcam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101978422 (Nrcam)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
L1 family
101978422 (Nrcam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_C17orf99
Ig_5
fn3_2
INCA1
Motif
Other DBs
NCBI-GeneID:
101978422
NCBI-ProteinID:
XP_005335987
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MQLKIMPKKKRLSVGRVPLVLLLCQMISALEVPLDPKLLEDLVQPPTITHQSPKDYIIDP
RENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLIINIMSEGKAETYEGV
YQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPIILRNGQSLVLPCRPPIGLPPAIIFW
MDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVVS
VDELNDTIAANLSDTEFNGAKSSRERPPTFLTPEGNASHKEELRGNVLSLECIAEGLPTP
IIYWIKEDGILPINRTFYRNFKKTLQIIHVTEADSGNYQCIAKNALGAIHHTISVTVKAA
PYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFS
NVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCVFFG
SPLPTIEWFKGAKGSALREDIYILHENGTLEIPVAQKDSSGTYTCVARNKLGMAKNDVHL
EIKDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLVPTVTWLKDNSELPNDERFTVDKDH
LVVADVNDNDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTNQLD
KSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQTTAQLKLSPYVNYSFR
VMAVNSIGRSLPSEASEQYLTKATEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGL
QYKVSWRQKDGDDEWTSVVVANVSKYIVSGTPTFVPYLIKVQALNDVGFAPEPAVVMGHS
GEDRKCLLPFPFYSSPAKETYQGVNQGHFQRCLGLQRRKIYYWKAQSSSKRNRRHIEKKI
LTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFTTPEGVPSSPSSLKIVNP
TRDSLTLEWDPPSHPNGILIEYTLKFQPINSTHELGPLIDLKIPANKTRWTLKNLNFSTR
YKFYLCAQTSAGSGSQITEEAMTTTDEAGILPPDVGAGKVQAVSPRISNLTAAAAETCAN
ISWEYEGPEHVNFYVEYGVAGSKEEWRKENVNGSRTFFGLKGLMPGTAYKVRVVAVGDSG
FVSSEDVFETGPAMASRQVDIATQGWFIGLMCAVALLILILLIVCFIRRNKGGKYPVKEK
EDAHADPEIQPMKEDDGTFGEYSDAEDHKPLKKGSRTPSDRTVKKEDSDDSLVDYGEGVN
GQFNEDGSFIGQYSGKKEKEPAEGNESSEAPSPVNAMNSFV
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaaataatgccgaaaaagaagcgcttatctgtaggcagagtgcccctggtt
ctcctcctgtgccagatgattagtgcactggaagtacctcttgatccaaaacttcttgaa
gacttggtacaacctccaaccatcactcaccagtctccaaaagattacattattgaccct
cgagagaatatcgtgatccagtgtgaggccaaagggaagcctcctccaagcttttcttgg
acacgaaatggaactcattttgacatagataaagaccctctggtcaccatgaagcctgga
tcaggaacacttataatcaacattatgagtgaagggaaagcagagacttatgaaggagtc
tatcagtgtacggcgaggaatgagcgtggtgctgcaatttctaataacattgtcgtccgc
ccatccaggtcaccgttatggaccaaagaaaaacttgaaccaataatacttcgaaatggt
caatctttagtacttccctgtagacccccaattggattaccaccagctataatattttgg
atggataactcctttcaaagacttccacagagtgagagggtttcccaaggtctgaatgga
gacctttatttttccaatgttctcccagaagatacccgtgaagactatatctgttatgcc
agatttaatcacactcaaactatacagcaaaaacaacctatttctgtgaaggtagtttca
gtggatgaattgaatgacactatagctgctaatttgagtgacactgagtttaatggtgct
aaatcaagtagagagaggccaccaacatttttaactccagaaggcaatgcaagtcacaaa
gaggaattaagaggaaatgtgctttcattggagtgcattgcagaaggcctgcctacccca
attatttactggataaaagaagatggaatactacccatcaaccggacattttatcggaac
tttaagaaaaccttgcagattattcatgttacagaagcggattctggaaattaccagtgt
atagccaaaaatgcattaggagccatccatcataccatttctgtcacagttaaagcggct
ccttactggatcatggcacctcaaaatcttgtgctgtccccaggagaggatgggaccctg
atctgtagagctaatggaaaccccaaacccagaattagctggttaacaaatggagtccca
atagaaattgctcctgatgaccccagcagaaaaatagatggtgataccattattttttca
aatgttcaagaaagatcaagtgcagtttatcagtgcaatgcctctaatgaatatggatat
ttattggcaaatgcatttgtaaatgtgctcgctgagccaccacgaatcctcacacctgca
aatacactctaccaggtcattgccaacaggcctgctttgctagattgtgtcttctttggg
tctcctctgcctaccattgagtggtttaaaggagccaaaggaagtgctcttcgtgaagac
atttatattttacatgaaaatggaactttggaaattcctgtggcacaaaaggatagttca
ggaacgtatacatgtgttgcaaggaacaaattagggatggcaaagaatgatgttcacttg
gaaatcaaagatccaaccaggatcatcaaacagcctgaatatgctgttgtacaaagaggg
agcacagtatcctttgaatgcaaagtgaaacatgatcacactttagtccccactgtcaca
tggctgaaggacaacagcgagctgcccaacgatgaaaggttcactgttgacaaggatcat
ttggtggtagctgatgtaaatgacaatgacggtgggacctacacttgtgtggccaacaca
actctggacaatgtttctgcaagtgctgtgctcagcgttgtcgctcctactccaactcca
gctcccatttacgatgtgccaaatcctccctttgatttagaattgactaatcaactcgac
aaaagtgttcagctgtcctggaccccaggcgatgacaacaacagccccattacaaaattc
atcattgaatatgaagatgcaatgcatgaggcagggctgtggcaccaccaaactgaagtt
tctggaacacagaccacagcccagctgaagctgtctccttatgtgaactactccttccga
gtgatggcggtgaacagcatcgggaggagcctgcccagtgaggcgtctgaacagtatctg
acaaaagccacagaaccagataaaaatcccacggctgtggaaggactgggttcagagcct
gataatttggtgattacatggaagcccctgaatggttttgaatctaatgggccaggcctt
cagtacaaagtgagctggcggcagaaagatggtgatgatgaatggacatctgtggtggtg
gcaaatgtatccaaatatattgtctccggcacaccaacctttgtcccatacctgataaaa
gttcaggccctgaatgacgtgggctttgctccagagccagctgtagtcatgggacattct
ggagaagaccgtaagtgtctcctaccatttcctttttactcttccccagccaaagaaacc
taccaaggtgtaaaccaaggccatttccaaagatgcttaggtttgcaaaggagaaagatt
tactattggaaggcacagagttcatccaaaagaaacagacgtcacattgaaaaaaagatc
ctcaccttccaaggcagcaagactcatggcatgctgcctgggctggagcccttcagccac
tacacactgaatgtccgtgtggtcaatgggaaaggagagggcccagccagtcctgacaga
gtctttactactccagaaggagtccccagttcgccttcgtctttgaagattgttaatccc
acacgggactctctcactttggaatgggatccaccaagtcacccaaatggcattttgatt
gaatacaccttaaaatttcagccaattaacagtacccacgaattaggccctctgatagat
ttaaaaattcctgccaacaagacacgctggactttaaaaaatttaaatttcagcactcgt
tataagttttatttgtgtgcacaaacatcagcagggtcaggaagtcaaattacagaagaa
gcaatgacaactaccgatgaagctggtattcttccacctgatgtaggtgcaggcaaagtt
caagcagtaagtcccaggatcagcaatcttactgctgcagctgctgagacctgtgccaat
atcagttgggagtatgagggaccagagcatgtgaacttttatgttgaatatggtgtagca
ggcagcaaagaagaatggagaaaagaaaatgtaaatggttctcggaccttctttgggtta
aagggtctaatgccaggaacagcatacaaagttcgagttgttgctgtgggggactctggt
tttgtgagttcagaggatgtgtttgagacaggcccagcgatggcaagccggcaagtggat
atcgcgactcagggctggttcataggtctaatgtgtgctgttgcgctccttatcttaatt
ttgctgattgtttgcttcatcagaagaaacaagggtggtaaatatccagttaaagaaaag
gaagatgctcatgcagatcctgaaattcagccgatgaaagaagatgatggaacttttgga
gaatacagtgatgcagaagaccacaagcctttgaaaaaaggaagtcgaacaccttcagac
aggactgtgaaaaaagaagacagcgatgatagtttggttgactatggagagggggtgaat
ggccaattcaacgaggatggctcctttattggacaatacagtggtaagaaagagaaagaa
ccggcagagggaaacgagagctcagaggcaccttctcctgtcaatgccatgaattccttt
gtttaa
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