Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978436
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Entry
101978436 CDS
T10664
Symbol
Lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X5
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Membrane trafficking [BR:
iti04131
]
Endosome - Lysosome transport
Others
Others
101978436 (Lrba)
Endosome - Golgi transport
101978436 (Lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101978436 (Lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101978436
NCBI-ProteinID:
XP_005337652
UniProt:
I3MDV9
LinkDB
All DBs
Position
Unknown
AA seq
2859 aa
AA seq
DB search
MASEDNRGPSPPPTGDDGGGGGKEETPAEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
SNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWLVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSDALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSDEVDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV
SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLMLYTYLSTEFIG
TVNIYNTIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLM
FIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG
LRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCQESMEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLASIFREQQGKVDEEIEPCSSSSVQAITG
ISRDVDISLGSQQSDMKDSPLSPHFTTNSAENSSIEKISSVDSASNIELQMQNISNEDRK
TEQENQELLAEVTLEEIATNETKNAGDLEASSDIAESVTIFSNSFKTVDKDTTIISEITA
SLSSPSEEDASEMPELLEKSIAEEEEDDDYVELKVEGSPTEEASLHTDLPDNSLSPVASE
ASERLDTLSNDCKSIFKEEEPVTKKQSDSEAQDSKDSEFLAMPASGSSATSPEITVSQTT
VQSDVEQMLEKGQKTADLAGETISTSDCHGTIFEAPATSEQKIAKLDVSTVATDTERLEL
KASANTEPPQPQRHVLEMSRQQEQLGQGTAPDVVDGQRRDSRSALFRIPEFKWSQMHQRL
LTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLVSQVMDNMVMACGGILPL
LSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGG
ILRQCLRLVCAVAVRNCLECQQHSQLKVRGDTGKGLKTTSSIVLLGKSAAKSPVDIVTGG
ISPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQN
ERCNQSFKETGSENGNSSLPDVENTPAALSPLSSLSVEESVESTSSTRRRDSGIGEETAA
GLGSNVYVTPSTAPLGVSAGPDAISEVLCTLSLEVNKSQETKNDGGNELDNKVTTSVPIS
KNVNVKDILRSLVNIPADGVTVDPALLPPACLGALGDLSVEQPVQFRSFDRSVIIATKKS
AALPSTLTPNVSAHAVSVVSSVDSAQASDVGGESPGSRSSNAKLPSVPTVGSVPQDPISN
MSITERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVEL
VMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHR
HAEFESLCAQYSADKREEEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAV
SRPREFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHAADEDILAKGKQSIKSQA
LGNQNSENEVLLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSIVVKGTLSVTSSEL
YFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVM
FNFPDPATVKKVVNYLPRVGIGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFE
YLMFLNTIAGRGYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFF
AERFESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSVS
RAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFV
RINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSITDPVLR
EAVEAQIRSFGQTPSQLLIEPHPPRGSAMQASPLMFTDQAQQDVIMVLKFPSNSPVTHVA
ANTQPGWAAPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRR
QITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLIQVVFGHWDVVTCL
TRSESYIGGNCYILSGSRDATLLLWYWNGKSSGIGDNPGGETTTPRAILTGHDCEITCAA
VCAELGLVLSGSQEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGCFC
TFSVNGKLQATVETDDHIRAIQLSRDGQYLLTGGDNGVVMVWQVSDLKQLFAYPGCDAGI
RAMALSHDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8580 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacaatcgtggcccttccccgccaccaacaggtgatgacgggggaggt
ggagggaaagaagaaacccctgcggaagggggtgcattgtctctgaagccagggctcccc
atcaggggcatcagaatgaaatttgccgtgctgacgggattggttgaagttggagaagta
tccaatagggatatcgtagaaactgtctttaacctgctggtaggaggacagtttgatttg
gagatgaatttcattattcaagaaggtgagagtattatctgcatggtggacctactggaa
aaatgtgacattacttgccaagcagaagtctggagcatgttcacagccattttgaagaag
agtatacgaaatcttcaagtctgcacggaagtaggccttgttgaaaaagtgcttgggaaa
attgaaaaagttgataatatgattgcagatcttttagttgacatgttgggagtgctagct
agctataatttgacggttcgagaactaaagcttttcttcagtaaacttcaaggagataaa
ggacaatggcctccacatgctggaaagttgctgtctgtgttaaagcatatgcctcagaag
tatggtcctgatgcctttttcaactttccaggaaagagtgctgcagctattgcattacct
cctatagccaagtggccataccagaatggttttacatttcatacctggcttagaatggat
cctgtaaataatatcaatgttgataaggataaaccgtatttgtattgtttcagaaccagt
aaaggtcttggatattctgctcattttgttggaggctgtttgattataacatcaataaag
tcaaaaggaaaaggctttcaacactgtgtgaaatttgatttcaagccacaaaagtggtat
atggtaactatagtgcatatttacaatcggtggaagaacagtgagcttcgatgttatgtg
aatggtgagcttgcttcctatggagagataacatggcttgtcaacaccagtgatacattt
gacaaatgtttcctgggctcgtcagaaacagcagatgctaacagagtcttctgtggtcag
atgactgcagtttaccttttcagtgatgctcttaatgcagctcagatttttgctatttat
cagttaggcctgggatacaagggtacatttaaatttaaagcagaaagtgatcttttcctt
gctgaacatcacaaactcttactgtatgatggcaaactctccagtgccattgccttcaca
tacaacccgcgggctaccgatgcccagctttgcctggaatcttctcccaaggacaaccct
tcgatttttgttcattccccacatgcactcatgctccaggatgtgaaggcagttttaaca
cattccattcaaagtgctatgcattcaattggaggagtacaagtgctatttccacttttt
gcacagttggattataggcaatatttatctgatgaagttgacttgacaatctgttcaacc
ctgttggctttcataatggagctgttgaagaactcaattgctatgcaggagcagatgctt
gcctgtaaaggcttcttggtaataggatatagtcttgaaaagtcttccaaatcccatgtc
agcagagcagtacttgaactttgccttgcattttcaaaatatttgagcaatcttcagaat
gggatgcccttactgaagcaattgtgtgatcacattcttcttaaccctgccatatggatt
cataccccagccaaggttcaactgatgctctatacttatttgtccactgaattcattggt
acagtcaacatatataatacgattcgcagagttggtacagtgcttctcatcatgcacaca
ctgaagtactactattgggcagtgaatccccaagaccgaagtggtatcacccccaaagga
ttagatggaccacgacctaatcaaaaagaaatactttctctacgagcattcttgttgatg
ttcattaagcaattagtcatgaaggattctggagtgaaagaagatgaactgcaggccatc
cttaattacctactgacaatgcatgaggatgacaatctaatggatgtcctacagctgctt
gttgcattaatgtcagagcatcctaactctatgattcctgcttttgaccaaaggaatggg
ttacgtgttatttacaaacttctggcatcaaaaagtgaagggatacgagtacaagctctc
aaggcaatgggctattttttaaaacatctggccccaaagagaaaagcagaagtcatgctt
gggcatggattgttttcattgctagctgagagactcatgcttcagacaaatctaataaca
atgaccacatataatgttctttttgagattcttattgaacagatttgtactcaggtgata
cataaacagcatccagatcctgattcttcagtaaagattcaaaatcctcagatactaaaa
gtaattgcgaccctacttcgaaattctccccagtgccaagagagcatggaggttcgccga
gcctttctttctgacatgattaaactttttaataacagtagagaaaacaggaggagcttg
ctacagtgttctgtgtggcaagagtggatgctttctctctgctattttaaccccaagaat
tcagatgagcaaaagataacagaaatggtatatgccatattcagaatcctactttaccat
gcagtcaaatatgagtggggtggctggcgtgtgtgggtagacaccttatcaatcacacat
tcaaaggtcacttttgaaatacacaaagaaaaccttgccagtatatttagggaacagcaa
ggaaaagttgatgaagaaatagagccatgttcctcaagttcagtccaagccatcactggc
attagcagagatgtggatatttcattgggatctcagcagtcagacatgaaggattctcct
ctctctcctcatttcaccacaaatagtgctgaaaactcaagtattgagaaaataagttca
gtagactctgcatccaacattgaactgcaaatgcaaaatatatctaatgaagacaggaaa
actgagcaagaaaatcaggagttactggctgaagtcactttggaagaaatagcaacaaat
gagacaaagaatgcaggtgatttagaagcatcttctgacatagcagaatctgtgactatt
ttctctaattcttttaaaacagttgacaaagacacaaccatcatcagtgaaataactgct
tctctaagttccccctcagaagaggatgcttcagagatgccagagttactggaaaaatct
atagcagaggaagaggaagatgatgattatgtggaactgaaggtagaaggtagtcccact
gaggaagccagtctgcacacagatcttccagataatagtttgtctccagttgcttctgag
gccagtgaaagactggacacgcttagtaatgactgcaaatcaatatttaaagaggaagaa
cctgttactaaaaagcaaagtgatagtgaagctcaagattctaaagattctgagttcttg
gctatgccagcatcagggtcttctgctacctcaccagagatcactgtttcccaaacaact
gtacaatcagacgttgaacagatgctggagaaagggcagaaaacagctgaccttgctgga
gaaactatatcaactagtgattgtcatggtactatctttgaggctcctgctacttctgag
caaaagattgccaagttggatgtttctactgttgctacagataccgagagactggaatta
aaagccagtgcgaacacagaaccacctcaacctcagcgccatgtgcttgagatgtcaagg
caacaggaacagctaggacaaggaacagccccagatgtggttgatggacaaaggagagat
tccagatctgctctatttcgtattcctgagttcaagtggtctcaaatgcatcagcgtttg
ctcactgatctcttattttccatagaaacagatatacagatgtggagaagccattcaaca
aagacagttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaatt
catctcgtctctcaagtgatggacaatatggttatggcttgtgggggtatactgccattg
ctttcagctgctacatcggctacacatgaactggagaatattgaacctactcaaggcctt
tccatagaagcctctgtgacatttttgcagaggctaattagccttgtggatgtacttatt
tttgcaagttctcttggcttcactgaaattgaagctgaaaaaaatatgtcatctggaggt
attttgcggcagtgtctccgactagtgtgtgcagtggcagtaaggaattgcttagaatgt
caacaacattcacagctgaaagtcaggggagatacagggaaaggcctgaaaacaacctca
agcattgttctcttggggaaatctgcagcaaagagtccagtggacattgtgactggtggt
atatctccagtaagagatcttgacaggctcctgcaagacatggatattaatcgactcagg
gcagttgttttcagagacatagaggatagcaaacaagctcaattcttagctctggctgtt
gtatattttatctctgtccttatggtctcaaagtatagagacattttggaaccccaaaat
gaaaggtgtaaccagtcatttaaggaaactggtagtgaaaatgggaattcgtcactccct
gatgtagaaaacacacctgcagcacttagtcctttaagttcattgtcggttgaagaatca
gtggaaagcacatcatctactcgaaggagagactcaggcattggggaggaaacagctgct
ggtttaggaagcaatgtgtatgtaactccttcaacagcacctctgggtgttagtgcaggc
ccagatgcaatcagcgaggtgctatgcactctttcattagaagtcaataaatctcaagag
accaaaaatgatggaggaaatgaattggataacaaagtgacaacctcagttcctatttca
aaaaatgtcaatgtgaaggacattcttcgaagcttggttaacataccagcagatggagtt
acagtggatcctgcccttctgccaccagcctgccttggtgctcttggtgatctgtctgtt
gaacaacctgtgcagttcagatcttttgacagaagtgtcatcatcgcaacaaaaaaatca
gcagccttaccttccacacttactccaaatgtatctgcccatgctgtcagtgtggtttct
tcagtagattcagctcaagcttcagatgtgggaggagagtctccaggcagtagatcatca
aatgcaaaattgccctcagttccaacagttggttcagttccacaagaccctatttcaaat
atgagtatcacagagagactggaacatgctttagaaaaggcagctcctcttctacgagag
atttttgtggattttgcaccttttctttctcggacacttttgggtagccatggacaagag
ctgcttatagaaggaacaagtctggtttgcatgaagtctagtagttcagttgtggagttg
gttatgctactgtgttctcaggagtggcagaattctattcagaagaatgcaggtcttgct
tttattgaacttgtcaatgaaggaaggttgcttagccaaacaatgaaggatcatctagta
agagtagcaaatgaagcggaatttatcctgagcaggcagagagcagaggatattcacaga
catgcggaatttgagtcactttgtgcgcagtattctgcagacaaacgagaagaagagaaa
atgtgtgatcatttgataagagcagctaaatatcgagaccatgtgacagcaactcaacta
atccagaaaatcatcaacattctcacagacaagcatggagcctggggaaattctgcagtg
agtcgtcctcgtgagttctggcgccttgactactgggaagatgacttgcggcgccggcga
cgatttgtgcgtaaccctctaggatccacacatcctgaagcgacactaaaaacagccgtg
gaacatgccgcagatgaagatatccttgctaaaggaaaacagtccatcaagagtcaggct
ttaggaaatcagaactcagaaaacgaggtcctcttggaaggcgacgacgatactctatca
tccgtggatgagaaagatttagagaatcttgccggtcccgttagcctgagcacaccagct
cagcttgtggccccctctattgtagtaaagggcactctttctgtcacctcctctgaactc
tattttgaggtggatgaagaggatcccaacttcaagaaaattgaccccaagatcctggca
tatactgaagggctgcatggaaaatggctgttcacagagatacgatccatcttttctcgt
cgttatcttttgcaaaatacagccctggagatctttatggcaaacagagttgctgtaatg
ttcaacttcccagaccctgcaacagtaaagaaagtggttaactatctacctcgtgttggt
attggaaccagttttggattacctcaaaccaggcgtatttcattagcaagtccacgtcag
ctttttaaagcttctaatatgacccagcgatggcaacaccgagagatttcaaattttgag
tacttgatgtttctcaacacaatagcaggacgaggttataatgacttaaatcagtatcct
gtatttccctgggtcatcactaattatgaatcagaagaactagatcttaccttgccaagc
aacttcagagatttgtccaagccaataggagctttgaatccaaaaagagcagcattcttt
gcagaacgttttgaatcatgggaagatgatcaagttccaaagtttcattatggtactcat
tactcaactgcaagtttcgttcttgcatggctgctaagaatagaaccttttacaacttat
ttcctaaatttgcaaggaggaaaatttgaccatgcagatagaactttttcatcagtttcc
agagcatggcgaaatagtcagcgtgatacatctgatattaaggagttgattcctgaattt
tattatctccctgagatgtttgtcaacttcaataattataatcttggagtgatggatgat
gggacagtagtgtctgatgtcgaacttccgccttgggccaaaacctcagaagagtttgtt
cgcataaacagattggccctggaaagtgaatttgtttcctgccagcttcaccaatggatt
gatctcatttttggctataagcagcaaggaccagaagctgtgcgagccctcaatgtgttc
tattacctgacctatgagggagctgtcaacctgaattcaataactgatcccgtgttgaga
gaggctgtcgaagctcaaatccgaagttttggacagacgccttctcaacttctcatagag
ccccatcctcccagaggttctgccatgcaagcgagtccattgatgttcacagaccaagcc
cagcaggatgtcatcatggtcctcaagttcccctctaactcccctgtcacccacgtggca
gccaacacccagcctggctgggctgctcctgctgtgatcacggtcactgctaatagactc
tttgctgtgaacaagtggcacaaccttcctgctcatcaaggtgctgtacaagaccagcca
taccagctgccagtggaaatcgatcctctcatagccagcaatacaggaatgcacaggagg
caaatcactgaccttttagaccaaagtattcaagtccactcccagtgctttgtcatcact
tcagacaaccgctatattctcgtctgtggcttctgggataagagtttccgagtgtactct
acagacacaggaaaattgatccaagtggtgtttggccattgggatgtcgtcacttgcctc
actcgttctgagtcatatattgggggaaattgctacattctctcagggtcacgtgatgct
acgcttctgctgtggtactggaatggaaaaagcagtggaattggagataacccaggtggt
gagactaccacccctcgggccattctgacaggccatgattgtgagatcacctgtgctgcc
gtctgtgccgagctgggcctggtgttgagtggctctcaagaaggaccatgtctcatacat
tccatgaatggagacttgttaaggaccttggagggtccggaaaactgcctgaaaccaaaa
ctcatccaggcttcacgagagggtcactgtgtcatcttctatgaaaacggctgcttctgc
accttcagtgtgaatgggaagctccaggccactgtggaaacagatgatcacatcagggcc
atccagctgagccgggacgggcagtacctgctcacaggaggagacaacggtgtggtcatg
gtctggcaggtgtctgacctcaagcaactctttgcctacccaggctgcgatgctggaatc
cgggccatggcactgtctcatgaccagaggtgcatcatttctggcatggcttcgggaagc
atcgtgctgttttacaacgactttaaccggtggcatcatgaataccaaacccgctactga
DBGET
integrated database retrieval system
