Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978438
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Entry
101978438 CDS
T10664
Symbol
Mefv
Name
(RefSeq) LOW QUALITY PROTEIN: pyrin
KO
K12803
pyrin
Organism
iti
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04621
NOD-like receptor signaling pathway
iti04623
Cytosolic DNA-sensing pathway
iti05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101978438 (Mefv)
04623 Cytosolic DNA-sensing pathway
101978438 (Mefv)
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
101978438 (Mefv)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101978438 (Mefv)
Membrane trafficking [BR:
iti04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
101978438 (Mefv)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PYRIN
PRY
zf-B_box
GATase_2
Motif
Other DBs
NCBI-GeneID:
101978438
NCBI-ProteinID:
XP_040134493
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MPQLRHWPRPHPESQFPRKHQAFPVLSVISQAATSSSSGSRSGGCFYYQKPDSWLQSLLI
SAMDKTLSDHLLNTLEELVPYDFEKFKFKLQNTNLEKEHSRIPRGHLQMARPVKLANLLI
IHYGEKHAVQLTLKVLRAINQRLLAEELHKATGQEYPAQDSGTDTSTGSSPGENKLKSQK
EPDGPEGDGQQQSGGGAASLLSSQHEAGRGPQKKSQSKRRDQKGPEVLDMQGKPLARSTG
LPSKRSLALAQLPGEKEIRKNAQLRRNASSAGRLQGLSSGAPGRKESKKSEVYLHSVKPR
PRSFEFIIPSEDRESSNAETILTSLQKMKNAKPDSAASPRGRVILDGEATVALEMGSTNP
EHSRVLEGKTVMNTLCNALLAGEEKSISPWEERGVGGPTTHETLEKMKGRVFHESSNPEV
PSSSGKKGSLGRPDILRNGGLWIDHSGDFSIAMSPGRPQDKAAFPLCHTPKGDLLAGTCV
LDSCSCPVASGEPKTPRSHLPSCQQCQAPLNKNSSGGLSPEPLPQCQRHMKQVQLLFCED
HREPICLICRLSQEHQGHRVRPIEEAALEYREKIQKQLEHLKELRKSGEEQRSQGDKKTE
SLLKQTETQKQRIRCQMKQLCQFLEWQEQLFVTWTEELGQTIGQVRETFGTRVSQHISRL
DELIGELEAKQSQSEWEIMQDIGVTLHRAKMMTIPEPWAAPPEVKEKIQLLYQKAEFMER
NTRYFSETLRSEMEMFNVTELMAAQAHAASVILDPATAHPNLVFSDDMKSVRLGNKDERQ
SDSPERFDNCITLGSPSFFSGCHYWEVEVGDKTAWILGVCEASVCRKGSMTLSPENGYWV
VMMKQNEYLASTCPPTRLQLRKPPRRVGIFLDWKKGDISFYNVTARSHIYIFTGFSSSGP
LQPIFCPGKHDGGKNMGPLTICPVSGXGPH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgccacagcttagacactggccacgccctcatcctgaatctcagttccctcgaaaacac
caagcatttcctgtgctttcggttatttcacaagctgccacttcctcatcctcaggttct
aggtcagggggctgcttctactaccaaaaaccagacagctggcttcagtctcttctgatc
agcgccatggacaagactcttagtgaccatctgctgaacaccctggaggaactggtgccc
tatgactttgagaagttcaagttcaagctgcagaacaccaatttggagaaggagcactcc
cggattccccggggccatcttcagatggccaggccagtgaagctggccaacctattgatt
atccattacggggagaaacatgctgtacaactgaccctgaaggtcctgcgtgccatcaac
cagcgcctcctggcagaagagctgcacaaggccactggccaggaatatccagcacaagac
agtggcaccgacacatccacagggtcttctcctggagaaaataagctcaagagccagaag
gaaccagatggcccagaaggtgatgggcagcagcaaagtggtgggggggcagccagcctg
ctgtccagccagcatgaggcagggagggggcctcagaagaagtctcagagcaaacggagg
gatcagaagggtcctgaggtcctggacatgcagggaaaacctctggccaggagcacaggg
ctgccctccaaaagaagcctggcccttgcccagctgccaggggaaaaggagattaggaag
aatgcccagctccgcaggaatgccagctctgcaggaagactccagggcttatccagcggg
gctccaggaaggaaagaatccaagaaatctgaagtatatttacattcagtgaagccgcga
cccagaagttttgaatttatcattccttcagaagacagagaatcctcaaatgcagaaact
attctgacttctcttcagaaaatgaaaaatgcaaaaccagactcagcagccagccccagg
ggaagagtcattctggatggagaggctactgtggctctggagatgggctccacaaaccca
gagcattccagggtcctagaagggaaaacagtcatgaacacactatgcaatgcattattg
gcaggagaggagaaatccatatcaccttgggaggagcgtggagttggaggtccaacgacc
catgagaccctggagaagatgaaaggccgtgtgttccatgagtcctcaaatccagaagta
ccttcgtcttcaggtaaaaagggatccctgggaagacctgacatccttaggaatggtggc
ctttggattgaccactcaggagatttttccattgccatgtccccagggaggccacaggac
aaggctgcatttcccctttgccacacaccaaaaggagatctgcttgctggtacctgtgtg
ctggattcctgcagctgtccagttgcttcaggggagcctaagacccctagaagtcacttg
cctagctgccagcagtgccaggccccactcaacaagaacagctctggaggcctgagccct
gagcctctgccacagtgccagcgccacatgaagcaggtgcagctgctcttctgtgaggat
cacagggagcccatctgcctcatctgcaggctgagtcaggagcaccaaggtcaccgggta
cgccccattgaggaggctgccttggaatacagggagaaaattcagaagcagctggagcat
ctgaaggagctgaggaaatctggagaggaacagagatcccagggggataagaagacagag
agcctcctgaaacaaactgaaacccagaagcagaggatccggtgccaaatgaagcagctg
tgccagtttctggagtggcaggagcagctatttgtgacctggacggaggaactgggccag
accattggccaggtcagagagacctttggcactcgggtatcccagcacatctcccgcctt
gatgagctgattggggagttggaagccaagcaaagccagtcagaatgggagatcatgcaa
gacatcggagtcaccttgcacagggccaagatgatgactatccctgagccatgggctgct
cctccagaagtgaaagaaaagatacaactgctctatcagaaagcagagtttatggagagg
aacacacggtacttctcagaaacactgcgatcagaaatggaaatgttcaatgttacagaa
ctgatggctgctcaggcacatgctgctagtgtaatcctggatccagcaactgcccacccc
aaccttgtcttctctgatgacatgaaaagtgtgagacttggtaacaaagatgagcgacaa
tctgacagcccagaaagattcgataactgcatcaccctgggttctcccagtttcttctct
ggctgccattactgggaggtggaggttggagataagacagcatggatcctgggagtgtgc
gaggcatccgtgtgcaggaagggaagcatgactctgtcaccagagaatggctactgggta
gtgatgatgaagcaaaatgagtacctggcctctacctgtcctccaacccgtctgcaacta
agaaagccccccaggcgtgtgggcatcttcctggactggaagaagggagatatttctttt
tataatgtaacagctagatcgcacatctacatatttactggcttctcttcctctggaccc
cttcaacctatcttctgccctgggaaacatgatggagggaagaacatgggtcctctgact
atctgcccagtgagtggctaggggccccactga
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