Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978495
Help
Entry
101978495 CDS
T10664
Symbol
Patj
Name
(RefSeq) inaD-like protein
KO
K06092
InaD-like protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04390
Hippo signaling pathway
iti04530
Tight junction
iti05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
101978495 (Patj)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101978495 (Patj)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101978495 (Patj)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
Motif
Other DBs
NCBI-GeneID:
101978495
NCBI-ProteinID:
XP_040145117
LinkDB
All DBs
Position
Unknown
AA seq
1806 aa
AA seq
DB search
MPENPATDKLQVLQVLDRLKMKLQDKGDTSQNEKLSMFYETLRSPLFNQILTLQQSIKQL
KGQLSHIPSDCSANFDFSRKGLLVFTDSSITSGNAHRPCNNLTASGLFPWTSKLGNEDFN
SIIQQMAQGREIEYIDIERPSTGGLGFSVVALKSQNQGEVDIFVKEVHPGSVADRDQRLK
ENDQILAINHTPLDHNISHQQAIALLQQTGGSLHLVVAREPVHTKSRTSTSSADTTLPET
VCWGHIEDVELINDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTN
VQGMTSEQVAQVLRNCGNSVRMLVARDPKGEISETPPTPAALPVALPAAVANTSPSSVSA
LILLKSGMRYETMKDKKSFSFLLFPYGCVPSGEASGIYVKSIIPGSAAYYNGQIQENDKI
VAVDGVNIQGFANHDVVEVLRNAGQLVHLTLVRRKAPSSASLLEQPTDRGTVVEPPKSPA
LFITGAVETETNLDAEDEDIEERMDNQKKDNIQALEKLERVPNTPENELKSKWENLLGPD
YEVMVATLDTQIADDAELQKYSKLLPIHTLRLGVEVDSFDGHHYISSIVPGGPVDMLNLL
QLEDELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDEASVDEPMTTETLLPE
MEVENRIDVSPEDEDDGELALWSPEVKIVELVKDHKGLGFSILDYQDPLDPTRSVIVIRS
LVADGVAERSGELLPGDRLVSVNDYCLDNTTLAEAVEVLKAVPPGTVHLGICKPLVEDEK
EESCYILHSNSNEDKTEPPGTILDMNSSLILEAPKVLKLFKLWASEQHDQRLCASIRLIV
LVMMKEHFGIDSLPSIPSTDGDCQHSRFDDMENLNSLAKSSLDLDMMIPNDVQGPSMLTD
LPAVAPRREQEDLPLYQLPRTRVVSKASVYPGMLSSRYATDACELPEREEGEGEETPNFS
HWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEEIKGIFIKQVLEDSPAGKTNALKT
GDKILEVSGVDLQNASHNEAVEAIKNSGNPVVFVVQSLSPTPRVIPNIHNKGNKIAKNQS
QDTPEKKEKRQGTAPPPMKLPPPYKAPSVDSDENEEENAFTDKKIRQRYADLPGELHIIE
LEKDKNGLGLSLAGNKDRTRMSIFIVGINPEGPAAMDGRMRIGDELLEINNQILYGRSHQ
NASAIIKTAPSKVKLVFIRNEDAVNQMAVPPFPLPSSSPSSIEDQSGIEPVSSEEDGNLE
VGVKQLPGSDSSNLEDLSQVIGQGVVADHQKTLEYPTDDAASQMKEQKYSTKASFSSQEI
PLAPTPSYHSSDTDFTSCGSFQAPLSVDPATCPIVPGQEMIIEISKGRSGLGLSIVGGRD
TPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRTSSHEEAITALRQTPQKVRLVV
YRDEAHYKDEENLEIFPVDLQKKAGRGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQ
GDQILSVNGEDMRNASQETVATVLKCAQGLVQLEIGRLRAGSWASSRKTSPNSQGDPHST
HSSCRPSLAPVIAGLQNLVGTKRTPEPSQRISGTDMGPRTVEIIRELSDALGISIAGGKG
SPLGDIPIFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIIL
QVVADTNISAIATQLENMSTGHHCGSPTADHPSEDTETPPPKIITLEKGSEGLGFSIVGG
YGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQILAVNGETLEGVTHEQAVAILKHQRGTV
TLTVLS
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatcctgccacagataaactgcaggtcctgcaggtccttgatcgcctgaaa
atgaaattgcaggataagggtgacacttcacagaatgagaaactgagtatgttttatgag
acactaaggagtcctctcttcaaccagatactcacactgcagcagtctatcaagcaactg
aaggggcaactcagccatataccctcggattgttcagccaactttgatttttctagaaaa
ggtttgttagtgttcacggatagttctattacaagtgggaatgcccacaggccctgtaat
aatttaactgcatctgggttgtttccgtggacctcaaagttgggaaatgaagactttaac
tcaatcattcaacagatggctcagggccgggaaattgaatatatagatatagaacggcct
tcaactggaggccttggattcagcgtggtggcccttaaaagtcaaaatcagggagaagtt
gatatctttgtgaaggaagtacacccagggagtgtagcagacagggatcaaagattaaag
gaaaatgaccagattttggccattaatcacacaccactggatcacaatatttctcaccag
caagcaattgcattattacaacaaacgggtggatctttgcatctggttgtagccagggaa
ccagtccacacaaaaagcaggacttctaccagctcagctgatacaactctgcctgaaaca
gtttgttggggccatatcgaggatgttgaactcattaacgatggctctggattaggattt
ggaatagttggaggaaagtcaagtggcgtagtggtgaggaccatagttcctggaggatta
gctgatcgagatggaagacttcagacaggggaccacatcttgaagattggtggcacgaat
gtgcagggaatgacgagtgagcaagttgcccaagtgctgaggaactgtgggaattcagtc
aggatgcttgtggctagagacccaaaaggcgaaatttcagaaacgcctcctactcctgcg
gccttgccggttgccctgcctgctgctgttgccaacactagcccttcctctgtgagtgct
ctaatccttcttaaatcaggcatgaggtatgagacaatgaaagataagaaatcctttagc
tttcttctttttccatatggttgtgtaccttcaggggaagcttcagggatttatgtgaaa
agtataatacctggcagtgctgcatactacaatggccaaatccaagagaatgacaaaata
gttgctgttgatggtgtaaatattcagggttttgcaaatcacgacgttgttgaagtgtta
cgaaatgcagggcagttggtccacctaaccctagttcgcaggaaagcgccatcatctgct
tctctcctggaacagcctacagacagaggaactgttgtagaaccacccaaatcaccagct
ctctttataactggagcagtggaaacagaaactaatttggatgcagaagatgaggatatt
gaagaaagaatggataatcaaaaaaaggacaatatacaagccttagaaaaattggaaaga
gtcccaaacactccagaaaatgagctgaaatccaaatgggaaaacctactgggccctgat
tatgaagtaatggttgctactttggacacacagattgccgatgatgctgagttacagaag
tattcaaagctgctgcctatccatactctgaggcttggtgtggaagtggattcctttgat
gggcaccattacatttcttcaattgttcctggtggtcctgttgatatgctgaaccttcta
cagctagaggatgagcttcttgaggtcaatggtgtgcagctttatggaaaatctcgtcga
gaagcagtttcctttcttaaagaagtgccacccccttttaccttggtttgctgtcggcgg
ctatttgacgatgaagcctctgtagatgaaccaatgactactgaaacccttcttcctgag
atggaggttgaaaacaggatagatgtcagtcctgaagatgaggatgatggggaattagct
ttgtggtctcctgaagtcaagattgttgagctagtgaaagaccataaaggcttggggttc
agcattctggattaccaggaccctttagatcccacaagatcagtgattgtgatccgctcc
ctggtagcagatggtgtagcagaaagaagtggagaacttttacctggagaccgcctggtc
tcagtcaatgactactgtttggacaataccacacttgctgaagctgtggaggtactgaag
gccgtgcctccaggcactgtacaccttggcatctgtaagcctttggtggaagatgagaaa
gaagaaagttgttacattttacattcaaacagtaatgaagacaagactgaacctccagga
acaattcttgatatgaattcatctttaatacttgaagcacccaaggtattgaagctattt
aagttgtgggcatctgagcagcatgatcagagattgtgtgcttccatacgattgatcgtg
cttgtgatgatgaaagaacattttggcattgattccctcccatccataccctcaactgat
ggagattgtcaacatagcagatttgatgacatggaaaatcttaattcattagcaaaaagc
agtctggatttagatatgatgattccaaatgatgtccaaggtcctagtatgctcactgat
cttcctgctgtggctcctagaagggaacaagaagatttacctttatatcaactgcccagg
acccgagttgtttcaaaggcctctgtctacccaggaatgctgtcttctagatatgccacc
gatgcatgtgagttacctgagagagaagaaggtgaaggagaagaaacaccgaacttcagc
cactggggtccaccaagaattgttgagatttttagagaacccaacgtgtctcttggtatc
agtattgttggtggacaaacggttataaaacgcctaaagaatggagaggaaattaaaggt
atattcatcaaacaggtgctagaagatagtccagcaggaaaaacaaatgcacttaaaact
ggagataaaatccttgaggtgtctggagtagatttgcagaatgcctcgcacaatgaagca
gttgaggccattaagaactccgggaaccccgtggtgttcgtggttcagagcttgtcacct
actccgagagtcattcctaacatacataataagggcaacaaaatcgccaaaaaccagagc
caagacactccagaaaaaaaggaaaagaggcaaggaacagctccacctcctatgaagctg
cctcctccttacaaagcaccgtctgtagacagtgatgaaaatgaagaagaaaatgcattt
actgacaaaaaaatcaggcaaaggtatgcagacctacctggagaactgcacattattgaa
cttgaaaaggataagaatgggctgggactcagccttgccggcaataaagacaggacacgg
atgagcatatttatagtaggaattaacccagaaggacccgctgcaatggacggacgaatg
cgaattggagatgaactgttagagataaataatcagatcctctatggaagaagtcaccaa
aatgcatctgccattattaagactgccccatccaaggtcaaacttgttttcatcagaaat
gaagacgcagtcaatcagatggctgtacctcccttcccattaccatcaagctccccatct
tctattgaggatcagagtggcatagaacctgttagtagtgaggaagatggcaacctggaa
gttggtgttaaacaattgcctggaagtgatagctccaacctggaagacctgtcccaggtg
attggtcaaggtgtggtggcagaccatcagaagacattggagtacccaactgatgatgct
gccagccagatgaaagagcaaaaatattcaacaaaagcctccttcagttcacaagagata
ccattagcgccaactccatcatatcattcatcggataccgacttcaccagctgtggtagc
ttccaggctcctctgtcagtggatcctgcaacgtgtcccattgtccctggccaggaaatg
attatagaaatatccaagggacgctcaggccttggtctcagcattgtgggaggaagagat
acacccttggatgctatagtcatacatgaagtctatgaagaaggagcagcagccagagat
ggaagactttgggctggtgaccagatattagaggttaatggggttgacctgaggacctcc
agccacgaggaagctatcacagccctgaggcagaccccgcagaaggtgcgactggtggtg
taccgcgatgaggcacactacaaggacgaggagaacttggagatcttccctgtggatctg
cagaagaaggccggccgaggactgggcctgagcattgttgggaaacggaatggaagcgga
gtgtttatttctgacatcgtgaaaggtggagctgcagacctggatgggaggttgattcag
ggagatcagatcctatctgtgaatggagaggacatgagaaatgcctctcaggagacggtg
gccaccgtcctcaagtgtgcgcaggggcttgtgcagctcgagatcggaagactccgagcg
ggttcctgggcctcctcgaggaagacatcgccaaacagtcagggagatccgcacagcaca
catagcagctgtcggccttccttggcccctgtcatcgctggcctacagaacctggttggc
accaaaagaactccagaaccttcccagagaatttcaggcacagatatgggaccaaggact
gttgagataatcagagagctcagtgatgcccttggaatcagtattgcaggaggaaaaggg
agtcccttaggagatatccctatatttattgccatgattcaggccagcggagtggccgca
cgtacacagaagcttaaagttggagatcggattgtcagcattaatgggcaacctctggat
gggctgtctcatgccgatgtggttaatctgctgaagaacgcctacgggcgcattatcctg
caggttgtagcagataccaatataagtgccattgccactcagcttgaaaacatgtctaca
ggccaccactgtggctcacccactgctgaccacccttcagaagacacggaaacacctcca
cctaagattattactttggagaaaggctctgaaggattggggtttagtattgtagggggt
tatggaagtccccatggagacctgccaatttatgtcaagactatatttgcaaagggagca
gctgcagatgacggtcgattaaagcgaggtgatcagattttagctgttaatggtgagacc
ctggaaggtgtcactcatgagcaagctgtcgccattctaaaacaccagagagggactgta
accttaactgtgctgtcgtga
DBGET
integrated database retrieval system
