Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978581
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Entry
101978581 CDS
T10664
Name
(RefSeq) protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Protocadherins
101978581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101978581
NCBI-ProteinID:
XP_013213559
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All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MDLQERIAQQIRQVLLSFVLLGGSLVCSETWRYSVAEEMEIGSFIANVIKDMDSSVEDLA
ARRARVIFDDYKPYLRLEQQTGNLVLNEQLDREALCDITEPCILHFQVLFENPLQFFRAE
LLIKDINDHTPMFLDEHILLKISEGTTPGTSFQMDSAQDLDVGRNGVQTYTVSPNPYFHL
NIQESVEGRKYPELVIDQSLDREKEPEIILTLTALDGGSPPRTGTSLIQVVVLDINDNAP
EFERPVYEVQVPENSPVGSLIITVSATDLDAGINGELSYSFSHIARDVRKTFEIHPISGN
IHLKTILDFEIIQSYTINIQAIDGGGLSGKSVIIVQVVDVNDNPPEIAMTSLTGLIPENS
SPEMVVAVFSIRDKDSGDNGRMICSIQDNLPFLLKPTFKNFYTLVTEYPLDREIRMEYNL
TITITDLGTPRLKTTHNITVVVSDVNDNAPAFSQTSYTLLVRENNSPALQIGSVSATDRD
SGTNARITYSLLPTQDPHLPLASLVSINADNGQLFALRSLDFEALQAFEFRVGATDQGSP
ALSSQALVRVVLVIALASVSSLFLFSVLVFVVVRLCRRRRAAPLGVYSVPEGHFPGHLMD
VSSTGTLSQSYQYEVCLKEGSGTSDFKFLQSINHNHQGTVNDTV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcaagagagaattgctcagcagataaggcaagtgctgctttcctttgttttg
ctgggagggtctttggtgtgttctgagacctggagatattctgtggcagaggaaatggag
attggctccttcatagccaatgtaataaaagatatggattccagtgtggaagatctggct
gcacggagggccagagtcatctttgatgactataaaccttacttgaggttggaacagcag
actggaaacttggtcttaaatgagcaactggaccgggaggcactttgtgatatcactgag
ccctgtatattgcatttccaggtgttatttgaaaatcctttgcaattttttcgggctgag
cttttgatcaaagacataaatgatcacactcccatgttcctagatgaacacatacttcta
aaaatatctgaaggtactacaccaggaacttcatttcaaatggatagtgctcaggactta
gatgtaggaaggaatggtgttcaaacctatacagtaagccccaatccttacttccacctt
aacatacaagagagtgttgagggcagaaaatacccagagctggtaattgaccaatctttg
gatcgggaaaaggagcctgaaattattttaactttaacagccttagatggagggtcccca
ccaaggactgggacttcactgattcaagttgttgtccttgatatcaatgataatgcccca
gagtttgagagaccagtctacgaggtgcaggtcccagagaacagccctgtgggctccttg
ataatcacagtgtctgctacagatttagacgcaggaataaatggagaactatcttattca
ttttctcatatcgctagagatgtgcggaaaacatttgaaatccacccaatttctggtaac
atccatttgaaaacaattcttgattttgagattattcaatcttatacaataaatattcag
gccattgatggtgggggtctttctggaaaatcagtcattatagttcaggttgtagatgtg
aatgacaacccaccagaaatagccatgacatctcttactggcctcataccagaaaactct
tcaccagagatggtggttgctgttttcagtatccgggacaaagattctggggacaatggg
aggatgatttgctcaattcaagacaacctcccctttctcttgaagcctactttcaagaat
ttctacactctggtaacagagtaccccctggacagagagataagaatggaatataatctc
accatcacgatcacggatttaggaacacccagattgaaaaccacacacaacataactgta
gtggtctccgacgtcaacgacaacgcccctgccttctcccaaacgtcctatactctgttg
gtgagagaaaacaacagccctgccttgcaaataggcagtgtcagtgccacagacagagac
tcaggcaccaatgcccggatcacctactcgctgctgccaacccaggatccgcacctgccc
ctcgcctccctggtctccatcaacgcagacaatgggcagctgttcgcgctgaggtcgctg
gactttgaggccctgcaggcgttcgagttccgcgtgggcgccacagaccaaggctcgccc
gcgctcagcagccaggcgctggtgcgagtggtgttggtcatcgccttggcctctgtgtca
tcgctcttcctcttctctgtgctggtgttcgtggttgtgaggctgtgcaggaggcgcagg
gcggcgccactgggtgtgtattcggtgcctgagggccactttcctggacacctgatggat
gtcagcagcactgggaccctgtctcagagctaccagtatgaggtttgtctaaaggaaggt
tcagggactagcgacttcaagtttctgcagtctattaatcacaaccatcaagggactgtg
aatgacacggtgtaa
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