KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101978641
Entry
101978641         CDS       T10664                                 
Symbol
Tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
  KO
K18341  TBC1 domain family member 1
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04152  AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04152 AMPK signaling pathway
    101978641 (Tbc1d1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:iti04131]
    101978641 (Tbc1d1)
Membrane trafficking [BR:iti04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    101978641 (Tbc1d1)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    101978641 (Tbc1d1)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab associated proteins
    101978641 (Tbc1d1)
SSDB
Motif
Pfam: RabGAP-TBC RabGap-TBC_2 DUF3350 PID ER
Other DBs
NCBI-GeneID: 101978641
NCBI-ProteinID: XP_005319962
LinkDB
Position
Unknown
AA seq 1251 aa
MEPITFTAKKPMFPNEISVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQSSKKEPA
TRQVRLWVSPSGLKCEPEPGKSQQWDPLICSSIFECKPQHVHKLIHNSHDPSYFACLIRE
DAAHRQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGR
VTVAHKKAPPALIDECIEKFNHVSCNQRADWDRAPEPRRPMRKSFSQPGLRSLAFRKEFQ
DASLRSGSFFSSFEENDIENHLISGHNIVQPTDIEENRTMLFTIGQSEVYLISPDTKKIA
LEKNFKEISFCSQGIRHVDHFGFICRESSGGGGFHFVCYVFQCTNEALVDEIMMTLKQAF
TVAAVQQTAKAPAQLCEGCPLQALHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFE
EVQKLRPRSEQRENELIISFLRCLYEEKQKEHIHVGEMKQASQIAAENIGSELPASATRF
RLDMLKNKAKRSLTESLESILSRGNKAKGLQEHSTSVDLDSSVSSTLSNISKEPSVGDKE
ALPISESSFKLLGSSDDLSSDSEGHFTEEPASLSPQQTFRRRANTLSHFPVGCPELPEPT
QGSPGVSQRKLMRYHSVSTETPHERNVDHPTIGESKPYSGQPSAPAPPLRLNPSASSPNF
FKYLKHNSSGEQSGNAVPKSISYRNALRKKLHSSSSVPNFLKFLAPVDENNTSDFMNTKR
DLESKANHVGDSGGTPVKTRRHSWRQQIFLRVATPQKACDSPGRYEDYSELGELPPRSPL
EPVCEDGPFGPVPEEKKKTSRELRELWKKAILQQILLLRMEKENQKLQASENDLLNKRLK
LDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQF
HLKHPFPSKQQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNIL
KAYSLLDQEVGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQM
YQLSRLLHDYHRDLYDHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEV
IFKVALSLLGSHKPLILQHENLETIVDFIKNTLPNLGLVQMEKTINQVFEMDIAKQLQAY
EVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQMANGRIQSLEATVEK
LLTSESKLKQAMLALELERSALLQVVEELRRQPAEPGTREPDCTQPEASGD
NT seq 3756 nt   +upstreamnt  +downstreamnt
atggaaccaataacattcacagcaaagaaacctatgtttcctaatgagatctcggtggac
tttggccttcagctggtgggctctttgcccgtgcattctctgaccaccatgcccatgctg
ccttgggttgtggctgaggtacggagactgagcgggcagtcctccaaaaaggagccagct
accaggcaggtccgactttgggtttcaccctccggactgaaatgcgaacctgaacctggg
aagagtcagcagtgggatccgttgatctgctccagcatcttcgagtgcaagcctcagcat
gttcacaaactgattcacaacagccatgacccaagttactttgcgtgtctgattagggaa
gatgccgcccaccggcagagtatctgttatgtcttcaaggccgatgatcaaacaaaagtg
cccgagatcatcagctccatccgccaggctgggaagatcgcccgccaagaggagctgcgc
tgcccctcggagtttgacgacacgtttgccaagaagtttgaggtgctcttctgcggccgc
gtgacagtggctcacaagaaggcccccccagcgctgattgacgagtgcatcgagaagttc
aaccacgtcagctgcaaccagcgggcagactgggaccgggcaccagagccccgtaggccc
atgcgcaagtccttctcccagcccggcctgcgctctctggccttcaggaaggagtttcag
gatgccagcctccgaagcggcagtttcttcagttcttttgaggaaaatgacattgagaac
cacctgattagtggacacaatattgtgcagccaacagatattgaggaaaatcgaactatg
ctcttcacgattggccagtctgaagtttacctcatcagtcctgacaccaaaaaaatagca
ctggagaaaaattttaaggagatatccttttgctctcagggcatcagacacgtggaccac
tttgggtttatctgccgggagtcttcgggaggtggtggcttccatttcgtctgttatgtg
ttccagtgcacaaatgaagctctggttgatgaaatcatgatgaccctgaaacaggctttc
acggtggctgcagtgcagcagacggcaaaagcgccagcccagctgtgtgagggctgcccc
ttgcaggccctgcacaagctctgtgagaggatagagggaatgaattcttccaaaaccaaa
ctagaactccaaaaacacctgacaacattaactaatcaggaacaggcaactatttttgag
gaggttcagaaattgagaccaaggagtgagcagcgagagaatgaattgatcatttctttt
ttgagatgtttgtatgaagagaagcagaaagaacatatccacgtcggggagatgaagcag
gcatcacagattgcagcagaaaatattggaagtgaattgccagccagtgccactcgattt
aggctagatatgctgaaaaataaagcaaagagatctttaacagagtctttagaaagtatt
ttgtcccggggtaataaagccaaaggcctgcaggaacactctaccagtgtggatctggac
agctctgtgtctagcacattaagtaacatcagcaaagagccgtctgtgggtgacaaggag
gccttgcccatctctgagagttccttcaagctccttggctcttcggatgacttgtccagt
gactcggagggccatttcacagaagagcctgcttcgctttccccccagcagaccttcagg
aggcgagcaaacaccctgagtcatttccccgtgggatgcccagaacttccagagcccact
cagggctctccaggggtctctcagagaaaacttatgaggtatcactcagtgagcacagag
acgcctcacgaacgaaacgtggaccatccaaccataggcgagtctaagccttactcaggc
cagccttcggcgcctgctcctccacttcgtcttaacccctccgcctcctcgccaaacttt
tttaagtacctaaaacataattccagtggagaacaaagtgggaatgctgtgccgaagagc
atctcgtaccgtaatgccctgcggaaaaaacttcattcttcctcctctgtgccaaatttt
ctaaaatttctggctcctgtagatgaaaataacacctctgactttatgaacacaaaaagg
gaccttgaatccaaagcaaaccacgttggtgactctggtgggaccccagtgaagacccgg
cggcactcatggaggcagcagatattcctgcgtgtggccaccccacagaaggcatgcgac
tcccctggcagatacgaggattattcagagctgggagagcttcccccacggtctccttta
gaaccagtatgtgaagatggaccctttggccctgtaccagaggaaaagaagaagacatca
cgggagcttcgtgagctgtggaaaaaggctattctgcaacagatactgcttctcagaatg
gagaaggaaaatcagaagctacaagcctctgagaatgacttgctgaacaagcgcctgaag
ctcgattatgaagaaatcactccttgtcttaaagaagtaactacagtgtgggaaaagatg
cttagcactccaggaagatcaaaaattaagtttgatatggaaaaaatgcactcggcagtt
ggacaaggtgtgcctcgtcatcaccggggtgaaatctggaaatttctagcagagcagttc
caccttaaacatccgtttcccagtaaacagcagccaaaggatgtgccctacaaagagctc
ctaaagcagctaacctcccagcagcacgccattcttattgacctcgggcgaacctttcca
acacatccgtatttctctgcccagctcggagcagggcagctgtcactttacaacattttg
aaggcctactcacttctagaccaggaagtaggatactgccaaggcctcagctttgtggca
ggcattttgcttcttcatatgagtgaggaagaggcgtttaaaatgctcaagtttttgatg
tttgacatgggactgcggaagcaataccggccagacatgataattttacagatccagatg
taccagctgtcgcggcttctccacgactaccacagagacctctatgatcacctggaggag
cacgagatcggccccagtctctatgctgcaccctggttcctcaccgtgttcgcctcgcag
ttcccactgggcttcgtagccagagtctttgatatgatctttcttcaggggtcagaggtc
atatttaaagtggctctgagtcttttgggaagccataagcccttgattctgcagcatgaa
aacttagaaaccatagtggactttatcaaaaacacactacctaacttgggcttggtacaa
atggagaagaccatcaatcaggtgtttgagatggacatcgctaaacagttacaggcttat
gaagttgagtaccatgtacttcaagaagaacttattgattcctctcctctcagtgacaac
caaagaatggataaattagagaaaaccaacagcagcttacgcaaacagaaccttgacctc
cttgagcaattgcagatggcaaatggtaggatccagagcctcgaagccacagtagagaag
ctcctgaccagtgagagcaagctgaagcaggccatgttggctctggagctggagaggtcc
gccctgcttcaggtggtggaggagctgcggaggcaacctgcagagccaggcactagggag
ccagactgcacccagcccgaggcctcgggggactaa

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