Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 106145247
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Entry
106145247 CDS
T10664
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106145247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
106145247
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106145247
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106145247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8
PHD_NSD
zf-ANAPC11
PHD
zf-UDP
zf_RING_Vps8_fungal
zf-RING_16
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
106145247
NCBI-ProteinID:
XP_040145372
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MHVPALPVKNLNGTGPVHPALAGMTGILLCAAGLPVCLTRAPKPILHPPPVSKSDVKPVP
GVPGVCRKTKKKHLKKSKNPEDVVRRYMQKVKNPPDEDCTICMERLVTASGYEGVLRHKG
VRPELVGRLGRCGHMYHLLCLVAMYSNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEFHLI
PHSLPGFADTQTIRIVYDIPTGIQGPEHPNPGKKFTARGFPRHCYLPNNEKGRKVLRLLI
TAWERRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGYPDASYLDNVLAELTAQG
VSEAAAKA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtccccgcgctcccggtgaagaacttgaatggtacgggaccggtccatccggcc
ctggcagggatgacggggatcttgctgtgtgcggcggggctgccagtgtgcctgacgcgc
gctccaaagcccatcctgcacccgcccccggtcagcaagagcgacgtcaagccagtgccc
ggcgtgcccggagtgtgccgcaagaccaagaagaagcaccttaagaagagtaagaacccc
gaggatgtggttcgaaggtacatgcagaaggtgaaaaaccctcctgatgaggattgcacc
atctgcatggagcgccttgtcaccgcatcgggctatgagggtgtgctgcggcacaagggc
gtgcggccagagcttgtgggccgcctgggccgctgtggccacatgtaccacctgctgtgc
ctcgtggccatgtactccaacggcaacaaggatggcagcctgcagtgccccacctgcaaa
gccatctatggggagaagacagggacccagccacctgggaagatggagttccacctcatc
ccccactcgctgcccggcttcgccgacacccagaccatccgaatcgtctacgacatcccc
acgggcattcagggccctgagcaccccaatccggggaagaagttcaccgccagaggattc
ccgcgccactgctatctgcccaacaatgagaagggccggaaggtgctgagactgctcatc
accgcctgggagaggaggctcatcttcaccatcggcacgtccaacaccacgggcgagtcg
gacaccgtggtgtggaacgagatccatcacaagacagagttcggctccaacctcaccggc
cacggctatccagatgccagctacctagacaatgtgctggccgagctcaccgcgcagggg
gtgtccgaggctgccgccaaggcctga
DBGET
integrated database retrieval system
