KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 120885624
Entry
120885624         CDS       T10664                                 
Name
(RefSeq) elongin-C-like
  KO
K03872  elongin-C
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04066  HIF-1 signaling pathway
iti04120  Ubiquitin mediated proteolysis
iti05170  Human immunodeficiency virus 1 infection
iti05200  Pathways in cancer
iti05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120885624
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    120885624
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    120885624
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    120885624
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    120885624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:iti04121]
    120885624
   03400 DNA repair and recombination proteins [BR:iti03400]
    120885624
Ubiquitin system [BR:iti04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     120885624
   Cul5 complex
     120885624
DNA repair and recombination proteins [BR:iti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120885624
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 120885624
NCBI-ProteinID: XP_040129124
LinkDB
Position
Unknown
AA seq 112 aa
MDGDEKTLGGREGPDAVYVKSMSSDGHECIVKREHALTSGTIKTMARGPGQFAENETNEV
RFREVPSHVLSKVCMYFTYKVRYTNSSTGIPEFPIAPETALELLKALNFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atggatggagacgagaaaacccttggtggccgtgaaggccctgatgccgtgtatgtcaag
tcgatgtcttctgatggtcatgaatgtattgtaaaaagagaacacgcactaacctcagga
acaataaaaaccatggcgagaggcccaggtcagtttgctgaaaatgaaactaatgaggtc
cgttttagagaggtcccttcacatgtgctatcaaaagtatgcatgtattttacctacaag
gttcgctacactaacagctccaccgggattcccgagttcccaattgcacctgaaactgca
ctggaactgttgaaggctttgaacttcctagattgttaa

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