Ipomoea triloba (trilobed morning glory): 115995581
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Entry
115995581 CDS
T07384
Name
(RefSeq) exopolygalacturonase clone GBGA483-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115995581
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115995581
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
115995581
NCBI-ProteinID:
XP_031090513
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Position
11:complement(3634509..3640208)
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AA seq
402 aa
AA seq
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MGSKVIQAAFIFSYVAYLVATVQGVEVNVKTSGAKADGKSDDTAAFKKAWDEVCKATEPS
TLTVPEGKYMVGQIGFLGPCKSAITFNAEGAEFIAPTDLSQFKTRSGWILFSMIKDLTVS
GGTMNGQGSAAWKINNCNKSFDGNCRNLPINLNLGTLTNSVVKGITSVDSKFFHMNVIQC
KNLTLSKITITAPGDSANTDGIHIGRSNGVTVNGADIKTGDDCISFGDGSQQVTVENVKC
GPGHGISIGSLGKYPNEQPVMGVTVKHCTLSNTLNGVRIKTWPASPNGVATGMHFEDVTM
DNVSNPILIDQEYCPWNQCKTGVPSKIKISDVSFKDIKGTSATKVAVKLLCSPGVPCDKV
ELSGVNLEYKGTNGSAISECDNVKPTLSGKNSPAICDAAKAA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaggtgattcaagctgcatttattttttcttatgtggcatatcttgtagca
acagtacaaggtgttgaggttaacgttaaaacatccggggcaaaagctgatgggaaatct
gatgatactgcggcttttaaaaaagcttgggatgaggtatgcaaagccacggagccaagc
acgctcacggttccggaaggcaaatatatggtgggtcaaattgggtttctaggtccttgt
aagagtgccataacatttaatgcggaaggggccgagtttattgcgccaactgacctgagt
cagtttaaaacacgaagtggatggattttgttcagcatgattaaagacttgacggtctct
ggtggcactatgaatggccaaggttctgctgcctggaagataaacaactgtaacaagagt
ttcgatggaaattgtagaaatctccccatcaacttgaacctgggtacattgacaaactcg
gtggtgaaaggaataacgtctgtggacagcaagtttttccatatgaatgtgatacagtgc
aagaacctaacgctgagtaaaatcaccatcacggcgccgggggacagcgccaacaccgac
ggaatccacattgggcgttccaacggggttactgtcaacggcgctgacataaagaccggc
gatgactgtatctcatttggggacggtagccagcaggtgaccgttgagaatgtgaaatgc
gggcctggccatggaatcagtatcggaagtttaggaaaataccctaacgaacaaccggtg
atgggagtaaccgtcaaacattgcacactttccaatactttgaacggagttaggatcaag
acgtggccggcgtctccaaacggcgtcgccaccggcatgcacttcgaagatgtgacgatg
gacaacgtcagcaacccaatcttgatcgatcaggaatattgcccctggaatcaatgcaag
accggtgtcccgtccaaaataaagatcagcgacgttagcttcaaggacataaaggggacg
tcggcgacaaaggtggcggtgaaattactatgtagccctggagtaccgtgcgacaaagtg
gagctaagcggggtgaacttggaatataaaggaactaacggcagtgccatatcggaatgt
gacaacgtgaagccaacactgtcgggcaaaaacagccctgcaatttgtgatgctgctaaa
gctgcttag
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