Ipomoea triloba (trilobed morning glory): 115995645
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Entry
115995645 CDS
T07384
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
115995645
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115995645
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
115995645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
AAA_19
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
115995645
NCBI-ProteinID:
XP_031090605
LinkDB
All DBs
Position
11:11254899..11283888
Genome browser
AA seq
2084 aa
AA seq
DB search
MFLQLPRLTSSLCDPFDVDQAYLHRKTILQGLKPRSSASSSEESELARNIVYKWDEASPE
LRQAYKQFIGSVRELVGGEVVQDEFREVALSVYRHFSGPMPEGEEDRIISEKKLDLQKLV
GYAIPNAVLHKAANLAQRLYELQENKHRTVPVLELEDGGGDNFEFGSDLVFQPPARFLVD
ASLEDLDFVVGHDKETSNYRNEYTHGYSFDGGHLPGAKFDLEWLRDACDRIVSESTSQLP
RDELAMAICRVLDSEKPGDEIAGDLLDLVGDGAFETVQDLIMHRKELVDAIHHGVSVLKA
DKMATSSQSRQPSYGTQVTVQTESEKLIDKLRRKEEKKHRRVADNGVENDLSLMNFSSLL
QASEKKNIFEDLIGRGEGPNSLATTALPQGTIRKHHKGYEEVIIPPTMTAPMKPGERLIE
IKELDDLAQAAFQGYKSLNRIQSRIYPTTYNSNENILVCAPTGAGKTNIAMISILHEIKH
HFREGYLHKNEFKIVYVAPMKALAAEVTMTFSKRLSPLNVTVRELTGDMQLSKNELEETQ
MIVTTPEKWDVITRKSSDMALSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQS
MIRIVGLSATLPNYLEVAEFLRVNPETGLFFFDSSYRPVPLAQQYIGISEHNFAARNELL
NEICYNKIVDSLRQGHQAMVFVHSRKDTGKTADKLVEISQKNEDWELFRNEQHPQFELKK
KEVLKSRNKEVVQLFDHGIGIHHAGMLRQDRSLTEHLFSEGLLKVLVCTATLAWGVNLPA
HTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRLL
TSQLPIESQFINSLKDNLNAEVVLGTVTNIKEACAWLGYTYLFIRMKMNPLAYGIGWEEV
IADPSLSLKQRDFITDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNE
MLRRHMNENELINLVAHSSEFENIVVRDEEQNELEMLARTYCPFEIKGGPSSKHGKVSIL
IQLYISRGSIDTFSLVSDASYISASLARIMRALFEICLRRGWCEMTALILEFCKAVDRQV
WPHQHALRQFDKDISADILRKLEERGADLDRLQEMEEKDIGALIRYAPGGKVVKQHLGYF
PSIQLSATVSPITRTVLKVDLVLTPEFVWKDRFHGTAQRWWILVEDSENDHIYHSELFTL
TKRMARGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLQAEAFYTITFHNLALPEAHTTHTE
LLDLKPLPVTALGNGMYEALYKFSHFNPIQTQAFHVLYHTDKNVLLGAPTGSGKTISAEL
AMLHLFNTQPDMKVIYIAPLKAIVRERMNDWRKHLVSQLGKKMVEMTGDYTPDLMALLSA
DIIITTPEKWDGISRNWHTRTYATKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTD
RPIRFVGLSTALANAQDLADWLGVDENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSM
NKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPIQFLNMPEDALQMVIS
QVMDQNLKHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVI
IKGTEYYDAKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF
PVESSLKEQLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLIVNPAYYGLEDAEPGTIS
SYLSSLVQSTFEDLEDSGCIKISDDSVEPLMLGSIASQYYLKYTTVSMFGSNIGPDTSLE
VFLHILSGASEYDELPVRHNEDKYNERLIDKVPYMVDNNRLDDPHVKANLLFQAHFSQSE
LPVVDYVTDMKSVLDQSIRIIQAMIDICANSGWLSSTLTCMHILQMVMQGLWFSRDSPLW
MLPCMTNDLYNSLSKRGVINVQQLLDLSSANLQSIVGNSVASKLHQDLQHFPRVQVRLRI
QRRDSGDNRSHTLNIRLENINTSRRTSKAFTPRYPKIKDEAWWLVLCNTTTSELYALKRV
SFSDRLMTHMDLPSAATTFQGMKLLLVSDCYLGFEQDYPIKEYS
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttcaactccctcgcctcaccagctctctatgtgatccattcgacgtcgatcaa
gcctatttacaccggaaaaccattctccaaggcctcaagcctcgcagttctgctagttcg
tccgaagaatcggagcttgctcgaaatattgtgtataaatgggatgaagcttctccagaa
ctgcgacaagcttacaagcagtttattggttcggtgcgtgagttggtgggcggtgaggtg
gtacaagatgagtttagggaggtggcattgagtgtttatagacattttagtgggccgatg
ccggagggtgaagaagaccgtataatttcagagaagaagttagatttgcaaaagcttgtt
ggttatgctattcctaatgcagttctacataaggctgcaaatttagcacaaagactttat
gagttgcaagagaacaagcatcgaaccgtgcctgtgctagaattggaagatggaggtggt
gataattttgaatttggatcagatcttgtctttcagccacctgctcgatttttagttgat
gcttccttggaagatttagactttgttgttgggcatgacaaagaaacttcaaattaccgg
aatgagtacactcatggttactcctttgatggtggtcatttaccaggagctaaatttgat
ttagaatggttaagagatgcttgtgataggatagttagtgaaagtacttcacagcttccc
agagatgaactggcaatggcaatatgccgtgtgcttgattcagagaaacctggtgatgag
atagctggtgatttgctagatcttgttggtgatggtgcattcgaaacagttcaggatctt
ataatgcatagaaaggaacttgttgatgccatccatcatggagtgtctgtactgaaagct
gacaagatggctacaagctctcagtcacgccagcctagttatggcactcaggtaactgtt
caaacagaatctgagaagctaattgataaacttcgtcgaaaggaagaaaaaaagcataga
cgtgttgcagataatggggttgagaatgacttgtctttgatgaactttagttctttactt
caagcaagtgagaagaaaaacatatttgaggatctcattgggcgtggtgaagggcctaat
tcattagctactactgcccttcctcaaggaaccattcggaaacatcacaagggatatgaa
gaagtcattatacctccaacaatgactgcacccatgaaacctggggaaagactgattgag
ataaaagaactagatgatttggctcaagctgcatttcaaggctacaaatctttgaaccgt
attcaaagccgaatatatccaactacttataatagcaatgaaaacatacttgtttgtgct
ccaactggggctggaaaaacaaatatcgctatgatatctattctgcacgagattaaacat
cactttagagaaggctacttgcataagaatgaattcaagatagtttatgtagctcctatg
aaggcattagcagcagaggtaacaatgactttcagcaaacgattgtctccactgaacgtt
accgtgagagaacttactggagacatgcagctttctaaaaatgaacttgaagaaactcag
atgatagtgacaacacctgaaaagtgggatgttattactcgcaaaagcagtgacatggca
ctttcaatgttggtgaagcttctgataattgatgaagttcatctattgaatgatgataga
ggccctgttatagaagcattagtagctcggactcttcgtcaggtggagtctacacaatcc
atgatacgaatagtgggtctttcagctacattacccaattatttggaggttgctgagttt
ctgagggtaaatccagaaacaggacttttcttctttgattccagctaccgacctgttcct
cttgctcagcagtatattggtattagtgagcataattttgcagcccgcaatgagctactg
aatgagatatgctacaacaagattgtggattccttaaggcaagggcatcaggctatggtt
tttgttcattctcgcaaagacacagggaaaacagcggataaacttgtcgagatttcccag
aaaaatgaagattgggagctctttcggaatgaacaacatcctcagtttgagcttaaaaag
aaggaagtactcaagtccagaaataaggaggttgtccagctttttgatcatgggattggt
attcaccatgctggtatgttgcgtcaagacagaagtctaactgagcatcttttctctgag
ggacttctgaaggtccttgtttgcactgcaaccttggcttggggggtgaatttgcctgct
catactgttgtgattaagggtacacaaatttatgatccaaaggctggtggatggcgagat
ctgggcatgcttgatgttatgcaaatttttggacgtgctggaagacctcagtttgataag
agtggtgaaggcattataattactactcatgataagttagcctactatctacgtttgtta
accagtcagcttccaatagaaagtcagtttataaactccttgaaagataatttgaatgct
gaggtggtactgggcactgtgacaaatattaaggaggcttgtgcttggcttgggtataca
tatcttttcatcaggatgaaaatgaatcctttggcatatggtattggatgggaagaggtc
attgctgatccatcattgagtttaaagcaaagggattttattactgacgctgcacgtgct
cttgacaaagcaaaaatgatgcgctttgatgagaaaagtgggaacttctattgtactgag
cttggacgtattgcaagccacttctacattcaatactctagtgttgaaacatacaatgaa
atgttgagacgccacatgaatgaaaatgagttaatcaatttggttgcccattcttctgaa
tttgaaaatattgtggtccgggatgaggaacaaaatgaacttgaaatgctggctcgaaca
tattgtccttttgaaatcaagggtggtccgtcgagcaagcatgggaaagtttcaattctt
attcagttgtacatttctcggggttcaattgatacattttcactagtttctgatgcttca
tatataagtgcaagcttggctcgtattatgcgggctctatttgagatttgtctacgtagg
gggtggtgtgagatgactgctctcatattagaattttgcaaggctgttgatcgtcaagtt
tggcctcaccaacatgcactcagacagtttgataaggatatttcagcagatatattgagg
aagcttgaagaaagaggagctgatttagatcgtttacaagagatggaggagaaagatatt
ggagctctgattcgttatgcaccaggaggaaaggtggttaagcaacatcttggatatttt
ccgtcaatccagttgtctgctacagtcagtccaatcactagaacagtgcttaaggtggac
ttggtattaacaccagaatttgtttggaaggatcgatttcatggtactgcacagcgctgg
tggattttggtagaggattccgagaacgaccacatataccattctgaactctttactttg
acaaagagaatggccagaggagagccacagaagctatcctttaccgtgccaatctttgag
ccacatcctcctcagtactacattcgtgctgtttctgactcttggctgcaggcagaggca
ttttatactataactttccataaccttgcccttcctgaggctcatacgactcatactgaa
cttctggacttgaagcctcttcctgtgactgcacttggaaatggaatgtatgaagccttg
tacaagttttcacacttcaatcctattcaaactcaggcttttcatgtgctctatcataca
gacaagaatgttctcctaggagctccgactggaagtgggaaaactatatctgccgagctt
gctatgctccatctttttaatactcagcctgatatgaaggttatatatatagcaccttta
aaggctattgtccgagaaaggatgaatgattggaggaagcatcttgtttcccagcttgga
aagaaaatggttgaaatgactggggattatacaccggatttgatggcactcttgtcagca
gatatcattattaccactcctgaaaagtgggatggaatcagccgcaactggcacactcgt
acatatgccaccaaggttgggcttatgattttggatgagatccatttacttggagctgat
cggggaccaatacttgaggttattgtttcaaggatgagatacatttcgtctcaaacggat
cgtccgatacgttttgtcggcctgtcaacagcattagcaaatgcacaagatctggccgat
tggctgggtgtagatgaaaatggtcttttcaatttcaaaccgagtgtcaggcctgtacct
cttgaggttcatatccaggggtatccgggaaagttttattgcccaaggatgaatagcatg
aacaaacccacatatgctgctatatgtacgcactcgcctacaaaacctgttttaatattt
gtttcatctcgtcgccagacacggctcactgcactggaccttattcagtttgcagcttca
gatgagcacccaattcagttcttgaacatgcctgaagatgcacttcagatggtcatttct
caagtcatggatcaaaacttgaagcatactttacagtttggtattgggctgcatcatgct
ggactgaatgataaggacagatctttggttgaggaactttttgcaaacaacaagatccag
gttttggtctgtacaagtacactggcatggggtgtgaaccttccagcacatttggtcatt
ataaagggaacagaatattatgatgcaaaggcaaaaagatatgtggattttcctattact
gatattctgcaaatgatgggtagagctggccgtccacaatatgatcaacatggaaaagct
gttatccttgttcatgaacccaaaaagagcttctataagaagtttctgtatgaaccattt
ccagttgaaagtagcctgaaggagcaattgcatgatcacatcaacgctgagatagtttct
ggaactatctgtcacaaagaggatgcagtgcattacctcacctggacatatttgttccgt
agattgattgtcaacccggcttattatggtttggaggatgcagaacctggaacaattagt
tcttacttgtctagcttagtgcagagcacatttgaggatttggaagacagtggatgcatc
aagattagtgatgatagtgtggagcccctaatgttagggtcaattgcttctcagtattat
ctcaagtacactactgtatcaatgtttggttcaaatataggaccagacacatcacttgag
gttttccttcatatattatctggtgcttctgaatatgatgagctcccagtgcgccacaac
gaggacaagtataatgaaaggttgattgataaagttccatatatggtggacaataatcgc
ctagatgatcctcatgtgaaagcaaatcttctttttcaggcacacttttcccaatcagag
ctaccagtagttgattatgtgacagacatgaagtctgtgctggaccagagtatacgtatt
atccaagccatgatagatatttgtgccaatagcgggtggctgtcaagcacccttacttgt
atgcatattttacaaatggtcatgcagggcctgtggttcagtagggattctcctctttgg
atgttgccatgcatgactaatgatttatacaactcattaagtaaacggggtgttattaat
gtccaacagcttttggatctttcttctgcaaatctgcaatctattgtagggaattctgtt
gcttcaaaactgcatcaggatctacagcattttcctcgtgttcaagttcgattaagaatt
cagagaagggattctggtgataacaggagtcacactctaaacattagactggaaaatatt
aatacgagtcgtagaacatccaaagcatttacacctcgatatccaaagataaaagatgaa
gcatggtggttagtcctttgtaacactactacttcagagctgtatgctttgaagagagtt
tccttctctgaccgtttaatgacacacatggacttaccatcagctgccaccaccttccag
gggatgaagctccttctagtctcagattgttatctagggtttgagcaagattaccccatc
aaagaatactcctaa
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integrated database retrieval system
