Ipomoea triloba (trilobed morning glory): 115995787
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Entry
115995787 CDS
T07384
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115995787
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115995787
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115995787
NCBI-ProteinID:
XP_031090786
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Position
11:complement(4923909..4929155)
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AA seq
483 aa
AA seq
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MMFLPSSTTIFLFCLFASLSPPFLSAAAFNLTLPHQHPYPEAVVQEVQRRVNESRRVLVS
TTEKDQCLTGNPIDDCWRCAGDWASNRQRLADCGIGFGQDAMGGKGGKIYIVSDSSDSDT
VEPKPGTLRHAVIQTEPLWIIFAADMTIKLKHELIFNSYKTVDGRGANVHITGGGCITLQ
YISNVIIHNVHIYNCVPTGNTNIRSSPTHVGYRSKSDGDAISIFGSRNIWIDHCALSHCT
DGLVDAIMGSTAITISNSYFSHHDEVMLLGHDDKYLPDSGMQVTIAFNYFGEGLVQRMPR
CRRGYIHVVNNDFTEWQMYAIGGSANPTINSQANRYTAPADPSAKEVTKRVDTGEGEWSD
WNWRTDGDLMVNGAFFVPSGDGARVTGQYAKASSLEPKSAELVDRITMNAGCLGGSRDNN
MMYGGGTTTSTSQSHSNSDDFFGMIFGSGAKAAPPAPTPTTTIFLSVLIISVLYIWSNGA
GQL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcttcccagttccaccaccattttcctgttttgtctctttgcctcattgtct
cctccgtttctcagtgccgccgccttcaacctcactctcccccatcaacacccctaccct
gaagctgtggttcaggaagttcagaggagagttaatgaatcgaggagggtgctggtgtcg
acgacggagaaggaccaatgcctgaccggaaaccccatcgacgactgctggcggtgcgcc
ggggactgggcgagcaaccggcaacgcctggcggactgcggcattggattcggacaagat
gcaatgggcgggaaaggcggcaagatctacatcgtctccgactcctccgactcggacacg
gtggagccgaagccagggacgctccggcacgccgtgatccaaacggagccgctgtggatc
atcttcgccgccgacatgaccatcaagctcaagcacgagctcatcttcaacagctacaag
acggtggacgggcgcggcgccaacgtccacatcaccggcggcggctgcattacgctccag
tacatcagcaacgtcatcatccacaacgtgcacatttacaactgtgtccccaccggcaac
acgaacatacgctccagcccgacccacgtcgggtaccggagcaagtccgacggcgacgcc
atttccatattcgggtccagaaacatctggatcgaccactgcgctttatctcattgtacc
gatggcttagtcgacgccatcatggggtccaccgccatcaccatctcaaacagctatttc
tcccaccacgatgaggttatgctactcggacacgatgataaatacttgccggactccggc
atgcaggtaacaattgctttcaattacttcggggaaggattagtgcaaaggatgccgcgg
tgccggcggggttatatacacgttgtgaacaacgatttcacggaatggcaaatgtatgct
atcggcggcagcgctaatcccaccattaacagccaggccaaccgctatacagcgccggcg
gaccctagtgctaaggaggtgacgaagcgcgtggatacaggcgagggagagtggagtgac
tggaactggaggacggacggggacttaatggtaaacggagcattcttcgtgccttccggc
gacggcgcgcgcgtcaccggccaatacgctaaggcctccagcctggagccgaagtcggcg
gagctcgtcgaccgtatcaccatgaacgccggttgcctcggcggatccagggacaacaac
atgatgtatggaggagggacaactaccagcacaagccagtcgcacagcaatagtgacgac
ttctttgggatgatatttgggagcggtgctaaagcagcgccccctgcccctaccccaacc
accaccatctttttgtctgtgctaattatttcagttttgtacatttggtccaatggagct
gggcaattgtga
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