KEGG   Ipomoea triloba (trilobed morning glory): 115995961
Entry
115995961         CDS       T07384                                 
Name
(RefSeq) uncharacterized protein LOC115995961
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115995961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    115995961
   03400 DNA repair and recombination proteins [BR:itr03400]
    115995961
Spliceosome [BR:itr03041]
 Complex B
  Other components
   Prp19 complex
    115995961
 Complex C
   Prp19-CDC5 complex
    115995961
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115995961
SSDB
Motif
Pfam: BCAS2 Spectrin
Other DBs
NCBI-GeneID: 115995961
NCBI-ProteinID: XP_031090968
LinkDB
Position
11:14005200..14008284
AA seq 189 aa
MVCNLFAPPLCNHSRSSSRIFRSPTTIIMSICLSSSLTEHIAAHSPPPSALLFSVGPSIS
IRSSLFRRTSHRHPHRPAAVGPNSSLLLFVFFSLQPSDQPPPAAPPFRRSAVLPQPPTLL
ENLDVMLNHGPNAWKLYNQRLEAFLARMQSQAVKLNEEIESVNRERKYHQQNTAYELNSL
STQWSELCL
NT seq 570 nt   +upstreamnt  +downstreamnt
atggtgtgcaatctctttgcaccacctctttgcaaccacagtagaagtagctctagaatt
ttcagaagtccaacaacaatcatcatgtctatttgccttagttcgtctctcacagaacac
atagccgcgcacagcccaccgccatccgctcttctcttctccgtcggaccatccatctcc
atccgctcttctcttttccgtcggaccagtcaccgccatccgcaccgccccgcagctgtc
ggaccaaactcttctcttctcctcttcgtcttcttctctctacagccgtcggaccagcca
ccgccagccgcaccgcctttccgtcgctcagccgtacttccgcaaccacctacattgctt
gaaaatctagatgtaatgttaaatcatggtcccaatgcttggaagctatacaaccaaaga
ctggaggcttttttagccagaatgcagtcacaggctgttaagttaaatgaagagattgaa
agcgtaaatcgagaaaggaaatatcaccagcaaaacactgcatacgagctgaattctttg
tccacacaatggagtgagctctgtttgtaa

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