KEGG   Ipomoea triloba (trilobed morning glory): 115996021
Entry
115996021         CDS       T07384                                 
Name
(RefSeq) autophagy-related protein 16-like
  KO
K17890  autophagy-related protein 16-1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:itr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    115996021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:itr04131]
    115996021
   03029 Mitochondrial biogenesis [BR:itr03029]
    115996021
Membrane trafficking [BR:itr04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    115996021
 Others
  Specific organelles associated proteins
   Auto phagosome
    115996021
Mitochondrial biogenesis [BR:itr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    115996021
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_IFT140_1st ANAPC4_WD40 PEP5_VPS11_N WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_NWD2_C SH3_2
Other DBs
NCBI-GeneID: 115996021
NCBI-ProteinID: XP_031091024
LinkDB
Position
11:complement(18526527..18527552)
AA seq 341 aa
MQQVEEHQPTNPPSPPRKKAKIQQNEPCPNTLIHKIKAHHAQCNSILFLNTPNHLVSGGR
DNNSDNNHNPSLKIWDTLTASFVNSLDGFNGFVSADLAFNPTNNLLVAGLSTHKLCVWDL
NHSTQPRRTLIGHDQKICAVDISQFTGRVVIGAAANSHVLKAWDLSRDPEIGSSCYPWIS
SYTSSPCNALRFTKDDTIFCSGHVNGTVKFTNIDRFFARSIGEIAAHTQPVTSICAMQDG
NVVLSSGRDNVHNVIDVRVMKVCGKLKSKGVKVVARTCVSPCGEYAAVGSTEGVVYVWSI
KMGKMVGALKGHGGPVVCCSWSSGGSPLASCDSDGNICIWS
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgcaacaagttgaagaacatcaacccacaaatccaccttccccaccaagaaaaaaggcc
aaaatccaacaaaatgaaccatgcccaaataccctcattcacaaaattaaagcccaccat
gcccaatgcaactccatcctattcctcaacactccaaaccatttggtcagcggtggaaga
gacaacaactcagataataatcacaacccttctcttaaaatatgggacacactcactgca
tcatttgttaactccctagatggtttcaacggttttgtctctgctgatcttgcctttaat
ccaaccaacaatctcctcgtggccgggctatccacccacaagttatgcgtttgggacttg
aaccactcgacccaaccccgacgtaccctaatagggcacgaccaaaaaatttgtgcagtg
gatatcagtcaattcacaggacgggtcgtgattggggccgcggccaatagtcacgtacta
aaggcttgggacttgtcccgggaccccgaaatcgggtcatcatgctatccttggataagt
tcctatacctccagcccatgcaatgctcttaggtttaccaaagatgacacaatcttttgt
tccggccacgttaatggcacggtgaagttcacgaatatagaccggtttttcgcacggtcc
ataggcgaaatcgcggcgcacacgcaacctgtgacgtccatttgtgcaatgcaagatggg
aatgttgtgttgagtagtgggagggacaatgtgcacaatgttattgatgttagggtcatg
aaagtttgtgggaagttgaagagcaaaggtgttaaagtagtggcgaggacgtgcgtgagc
ccttgtggggaatacgccgccgtgggctcgacggagggagtggtttatgtgtggtcgata
aagatggggaaaatggtgggcgctttgaaagggcacggtggtccggtggtttgttgtagc
tggagtagcggtgggagtccattggcttcttgtgatagtgatggaaatatttgcatttgg
tcttga

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