Ipomoea triloba (trilobed morning glory): 115996438
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Entry
115996438 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
115996438
04121 Ubiquitin system [BR:
itr04121
]
115996438
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115996438
Membrane trafficking [BR:
itr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115996438
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115996438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
DZR
zf-RING_Vps41
DUF7573
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115996438
NCBI-ProteinID:
XP_031091512
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All DBs
Position
11:19550231..19555710
Genome browser
AA seq
366 aa
AA seq
DB search
MSHAGISGGGGEGIGRGGGPQNYFCYHCERTVTISPLPNSELVCPNCNDTFLEEAETAPP
TNPSNDNPFFPGADAFPFGFGGGGGGGGGGVGGEGLVFSTASSGGGIALDDLSSLFGGMA
AGRSPNQFHPLLFLQNYLQTMRASGANIQLVFENSGGGGVPGNLGDYFVGPGLEQLIQQL
MENDPNRYGTPPAAKSAVEGLPDIKITQEMLASDSSQCAVCKDSFELDEEAKQMPCKHIY
HKDCIMPWLELHNSCPVCRYELPTDDPDYENRRNSQQQTRNNNNSFGLGIGGLGGGGNQE
NPQTPRTVERRFRVSLPWLFGGFGSPAETSNSGGGTGNNNGGSTGNNNGGNDNNRDDTGH
GPNSGS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatgccggaatttctggtggcggtggagaaggaatcggtcgcggcggcgggccg
cagaattacttctgctaccattgcgagcggacggtgacgattagccctttgccaaactcc
gaactcgtctgccctaattgcaacgatacctttcttgaagaagccgaaaccgccccgcct
acaaaccctagcaacgataatcccttcttccccggcgccgatgcgtttccttttggcttc
ggcggaggaggaggaggaggaggaggaggagtaggaggggagggccttgtgttctccacg
gcctcctctggcggtgggattgcgcttgatgatctttcttctttgttcggtggtatggcc
gccggccgatccccaaatcaattccatccccttcttttcctccagaactatttgcagacc
atgagggctagcggtgctaatattcaattggtttttgaaaacagtggcggtggaggggtt
ccggggaatcttggagattacttcgttggtcctggccttgaacagttgatccaacagctt
atggagaatgatcccaaccgctatggcactcctcccgctgccaaatctgctgttgaaggg
cttccggatatcaagatcacccaggagatgctagcttcagactcctctcaatgtgctgtt
tgcaaagatagtttcgagctcgatgaggaggcgaagcaaatgccttgcaaacatatatac
cacaaggattgcattatgccctggcttgagttgcataactcatgtccagtgtgtcgatat
gagttgcctactgatgatcctgattatgagaataggagaaactcacagcaacagactagg
aacaacaataacagtttcggtttgggtattgggggtttgggaggtggaggaaatcaggag
aatcctcagacacctaggacagtggaaagaaggtttagggtttcattgccatggctgttt
ggaggctttggatcccctgcagagaccagcaacagtggaggaggcactggcaataataat
ggaggcagcacgggcaacaacaatggaggcaatgacaacaacagagatgataccggtcac
ggcccaaattcaggttcctga
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