Ipomoea triloba (trilobed morning glory): 115996700
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Entry
115996700 CDS
T07384
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
itr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115996700
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115996700
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
itr01009
]
115996700
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
115996700
03036 Chromosome and associated proteins [BR:
itr03036
]
115996700
Protein phosphatases and associated proteins [BR:
itr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115996700
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115996700
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115996700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WDR55
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
115996700
NCBI-ProteinID:
XP_031091917
LinkDB
All DBs
Position
11:6580767..6590002
Genome browser
AA seq
518 aa
AA seq
DB search
MFSGGDGGGGGGNVAGPPQHLDWKFSQVFGERAAGEEVQEVDIISAIEFDKTGDHLATGD
RGGRVVLFERTDTKEHAGRRRELERMDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK
INKIRWCQAANSALFLLSTNDKTIKFWKVLEKKVKKISEMNIEPSRSIVNGSAASSSVSM
TPKPHLTNGGYPDRPYNCLSNDSSFPASGISALRIPVVVTSNETSLVARCRRVYAHAHDY
HINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTH
CNTLAYSSSKGSIRLIDLRQSALCDSHSKLFEEQEPAGSRSFFTEIIASISDIKFARDGR
YILSRDYMTLKLWDINMDSGPVATYQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVA
TGSYSNLFRVFGCAAGSTEATTLEASKNPMRRQAQTPSRPARSLSSITRVVRRGGESPGV
DANGNTFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcggtggtgatggtggcgggggcggaggaaacgtcgcgggcccgccacagcat
cttgactggaaattctctcaggtatttggtgagcgtgcggccggagaagaagttcaggaa
gttgatatcatctcagcaatcgagtttgataaaactggtgaccatcttgctactggtgat
cgtgggggtagggttgtattatttgaaaggactgatactaaagagcatgctggacgccga
agagaattggagcggatggactatccagttagtcggcatccagagttccggtacaagaca
gaatttcaaagccatgaaccagagtttgattatctcaaaagtttggagattgaggagaaa
attaacaagattcgatggtgccaggcagctaatagtgcgctctttcttctgtccactaat
gataaaacaataaaattttggaaggtgctagaaaagaaagtcaagaaaatttctgaaatg
aatattgagccttccagatccattgtaaatggcagtgctgccagctcaagtgtttctatg
actccaaaacctcatcttacaaatggaggctatcctgatagaccttacaattgcttgagc
aatgactcatcatttcctgccagtggcatctctgcgcttcgtatacctgtggtagttaca
agcaatgagaccagccttgtagcgagatgcagaagagtgtatgctcatgctcatgactat
catatcaattccatctccaataacagtgatggcgaaacatttatatcagctgatgatctg
cgaataaacctttggaacttggaaataagtaaccaaagtttcaatattgttgatgtgaaa
ccagcaaatatggaagatctaacagaggttataacttcggcagagtttcacccaacccac
tgtaacacgttagcttatagtagttcaaaaggatcaattcgtctcattgatttacgacaa
tcggcattgtgtgattcacattctaaattgtttgaggagcaagagccagctggttcaaga
tccttcttcactgagataattgcttcaatttctgatattaaatttgcaagagatggaaga
tacatcctcagtcgtgattacatgactctcaagttatgggacataaatatggattctggg
ccagttgcaacataccaggttcatgaatatttaagaccaaagctatgcgatttatatgag
aatgattcaatctttgataaatttgaatgttgcttgagcggtgatgggctgcgagtcgct
acagggtcctacagcaatctgtttcgtgtgtttggctgtgctgcgggaagcactgaagcg
actacactggaagcaagcaaaaaccctatgaggagacaagcccagaccccttcaaggcct
gccagatcccttagcagtataactcgtgttgttaggagaggaggagaaagtccaggtgta
gatgcaaatggaaatacatttgatttcacaacaaaattgctccatcttgcttggcaccca
tctgaaaattcaattgcttgtgctgctgcaaacagcttgtacatgtattatgcataa
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