KEGG   Ipomoea triloba (trilobed morning glory): 115996780
Entry
115996780         CDS       T07384                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115996780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:itr03019]
    115996780
   03041 Spliceosome [BR:itr03041]
    115996780
Messenger RNA biogenesis [BR:itr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115996780
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115996780
Spliceosome [BR:itr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    115996780
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2
Other DBs
NCBI-GeneID: 115996780
NCBI-ProteinID: XP_031092047
LinkDB
Position
11:4009381..4014170
AA seq 348 aa
MGSRRFNFGDGASPGKIFIGGLAKDTTLDQFVKYFGKYGDITDSVIMKDRQTGRPRGFGF
ITYADPAVVDTVIAETHIINGKQVEIKRTIPKGSAESKDIKTKKIFVGGIPTVVTEDELK
SFFSKYGKVVEHEIIRDHVTKRSRGFGFIVFDNEQVVDNILADGNMLDMSGTQVEIKKAE
PKKPSYSAPAPAYGSEPRGRGYADNYGGFGNNYSSFDSGGFGPASYRSYGGLGGGRFGEY
GYGAGEYGGRYGDFAGGDFGGGYRGEPSLGYSSRFGSYAGGLGGGYAGSGLGPYGRGGGG
YGGFGGAGSGAGYDSGPGAGYGGPGGMYGNRAGYSGPSGSGRYHPYAR
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgggatccaggagattcaacttcggcgatggcgccagccccggaaaaatcttcattggt
ggtttagctaaggatacaactctagatcaatttgtgaagtactttgggaagtatggagat
atcacagactctgttatcatgaaggaccgtcaaactggacgacccagggggtttgggttc
atcacgtatgctgatccagctgttgttgacactgttattgctgaaacccatatcatcaat
ggcaaacaggttgagataaagagaaccattcccaaaggatctgctgaatccaaggatatc
aagaccaagaagatttttgttggtggtattcctactgtggtaactgaagatgagttaaaa
agctttttctccaagtatgggaaggtggttgaacatgagatcataagagaccatgtgact
aaacgatcccgtgggtttggatttattgtatttgacaatgaacaagtggttgataatatt
ctggctgatggaaacatgctagatatgtctggtacccaggttgagatcaagaaagctgaa
ccaaagaaaccctcatactctgcacctgctcctgcctatggtagtgagcctaggggccgt
ggttatgctgacaactatggtggatttggcaataactatagcagttttgacagtggtggt
tttggccctgcctcttataggtcttatggaggccttgggggtggtaggtttggtgaatat
ggatatggtgctggtgaatatgggggccgctatggtgactttgctggaggtgattttggt
ggtggttaccgtggagagccctcacttggctactccagtcgctttggctcttatgctggt
ggacttggtgggggatatgctggcagtggtttaggtccatatggtcgtggtggtggtggt
tatggagggtttggtggagctggctcaggtgctggttatgattctggccctggtgctggt
tatggtggaccaggaggcatgtatggaaatagggcaggctatagtgggcctagtggcagt
ggtcgataccatccatatgccagatag

DBGET integrated database retrieval system