Ipomoea triloba (trilobed morning glory): 115997080
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Entry
115997080 CDS
T07384
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
115997080
03041 Spliceosome [BR:
itr03041
]
115997080
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115997080
Spliceosome [BR:
itr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115997080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
RMD1-3
Motif
Other DBs
NCBI-GeneID:
115997080
NCBI-ProteinID:
XP_031092414
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All DBs
Position
11:5155526..5160822
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AA seq
404 aa
AA seq
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MQQQRLKQQQALMQQSLYHPGLLAPQPIEPILSGNLPPGFDTSACRSVYVGNIHPQVTEL
LLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRGSAALAILSLNGRQLFGQPIKVNWAYA
SAQREDTSNHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKSGRSRGFGFVSFR
NQQEAQGAINDLNGKWLGSRQIRCNWATKGAGSSDDKQTSDAKSVVEITNGISDENQEKT
NEDAPENNPQYTTVYVGNLAPEVTSVDLHRLFHSLCAGVIEDVRVQRDKGFGFVRYSTHA
EAARAIQLGNARILFGKPVKCSWGSKPTMPGTSSAPLPPPAAHIPDVSATNLAAYEMQLA
LSKMGAAQALMHPQGQRIGAANHQAMYDGSYPGIATTQPPMYYQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagaggttgaaacagcaacaagcattgatgcagcaatctctataccatccg
ggccttctagctcctcagccgatagagcccatcttgagtggaaatctaccccctggcttt
gatacaagtgcttgccgcagtgtctatgttggaaacatccaccctcaagtcacagaactt
cttcttcaagaggttttctcaagtacaggtccccttgaaggatgcaagcttataagaaaa
gagaagtcgtcatatggctttgtggattattttgatcgcggctcagctgcccttgctatt
ttgtccttgaatggaaggcagttgtttgggcagcctataaaagttaactgggcttatgcc
agtgctcagagagaggacacttcaaaccacttcaacatttttgtgggtgatcttagccca
gaggttacagatgccaccttgtttgcatgcttttcggtctatcctagttgctcagatgca
agggtgatgtgggatcagaagtcaggacgctcaagggggtttggatttgtttctttccgc
aatcagcaggaagcacaaggtgcaataaatgacttaaatggaaagtggcttggaagcaga
caaattcgttgcaattgggcaacaaaaggtgctggatcaagtgatgacaagcagacctca
gatgctaaaagtgttgtggaaataacaaatggcatttcagatgagaatcaggagaagacc
aatgaagatgcacctgaaaataatccccaatataccactgtttatgttggcaatcttgct
cctgaagttacttctgttgacctccaccgtctctttcattccctttgcgctggagtcatt
gaagatgtccgtgttcaacgtgacaaaggctttggatttgtaagatacagcacccatgct
gaagcagctcgggccattcaactggggaatgcccgaattctttttggcaaacctgtcaag
tgctcgtggggaagtaagccgaccatgcctggaaccagttccgcccctctgccaccgcca
gcagcacacatacccgatgtttccgccaccaatctcgcagcctatgaaatgcaactcgcg
ttgagcaaaatgggcgctgcacaagctctgatgcacccccaaggccagcgaattggcgct
gctaatcatcaggcaatgtacgacggcagttatccgggcatcgccacaactcaaccacca
atgtactatcagtaa
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