Ipomoea triloba (trilobed morning glory): 115997146
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Entry
115997146 CDS
T07384
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03018
RNA degradation
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115997146
09123 Folding, sorting and degradation
03018 RNA degradation
115997146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
115997146
03041 Spliceosome [BR:
itr03041
]
115997146
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115997146
mRNA degradation factors
5'-3' decay
Lsm complex
115997146
Spliceosome [BR:
itr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115997146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
bHLH_SAC51
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
115997146
NCBI-ProteinID:
XP_031092513
LinkDB
All DBs
Position
11:1052172..1055071
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVVGTLKGYDQLLNLVLDEAIEYLRDSDDPLKT
TDQTRRLGLIVCRGTAVMLVAPTDGTDEIANPFLQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaggaaagaaacagttctagatttggcaaagttcgttgacaagggtgtgcaa
gtcaagcttactggtggcagacaagttgtaggaacactaaaaggctatgaccaattgctg
aatcttgtcttggatgaagccattgagtatcttagagattccgatgatcctctgaagaca
acagatcagacacggcgtcttggattaattgtgtgtagggggactgcagttatgcttgtg
gcgccaactgatggcacagatgagatcgccaatccttttctccagccagatggggcatag
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integrated database retrieval system
