Ipomoea triloba (trilobed morning glory): 115997525
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Entry
115997525 CDS
T07384
Name
(RefSeq) protein LHY isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
115997525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
itr03000
]
115997525
Transcription factors [BR:
itr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
115997525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
115997525
NCBI-ProteinID:
XP_031092955
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Position
11:25491147..25503444
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AA seq
774 aa
AA seq
DB search
MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEALIKGVPIGQALDIEIPPPRPKRKPVNPYPRKTVAGTPTPVVGGK
DGKLYAPDSSLCESKQTLGQEKEPLLEKPGGDKKLDIAKENREEVISDVLTLFHEGPTSP
SVRNRDSLPTQVAPQNSCTFREFVPIVKGANRDDANKSYVTVESKGNQEPDKLDTKQSFQ
DASSCNSLDMENSFPSKEKLTHGEKLDEPNQPDEVFTENDMQGVQSCPRHVPVHILDGSL
GMNTNNTQDMTYHESIVHQIGGVQGHLNQFTHHASSNTSEHQSNPSRSSIHHMFPSFHPM
MNSNCDSNDYRSCLHISSTFSSLIVSALLQNPAAHAAASFAASFWPYAANFEAPTDSCTG
TPGGVPSRQMNSVPSMAAIAAATVAAATAWWAAHGLLPLCSPLHTCFTCPTSSGTAVPMD
ACQTKVANNERKDGTPDPSLHVQQLDPGCTETLREQLSASKPPVLCSSDSEESDGMKVNT
TVTVTDTEQAAIVTELNDSNTTKNRKQVDRSSCGSNTPSSSEVETDALEKIEKDKEDPKE
SPHVNHTPTPTESGNRRGKNSSNPNDPWKEVSEEGRIAFRALFSREVLPQSFSPPHDLNS
KVKKNSEKGKLKGEQNEEDQKGLQLEVNDKSSITCSIHYGNKDREPSSCFGGGNNTLTMK
LGEGKLKACRTGFKPYKRCSVEAKESRIGGSSTSCQDEEKGPKRLRLGGGETST
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacacttactcctctggagaggaacttgtcattaagactaggaagccttatactatc
actaagcagcgtgagcgatggacagaagaggagcataacaggtttcttgaagctttgaaa
ctctatgggcgggcttggcaacgtattgaagaacatattggcaccaagactgctgtgcag
atccgaagtcatgcacaaaagttttttacaaagttggaaaaggaggctcttattaaggga
gttccaataggtcaagctcttgacattgaaattcctcctccacgaccaaagaggaaacca
gttaatccatatcctcgaaagacagtggcaggcactcctacccctgttgtagggggaaag
gatggaaagttatatgcaccagattcttctctgtgcgagagtaaacaaacactgggccag
gagaaagaaccgcttctggagaaacctggtggtgacaaaaagctggatattgcaaaagag
aacagggaggaggttatctctgatgtgcttacactttttcatgaaggtcctacctcccct
tcagtcagaaacagagattctttgccaacacaagtggcacctcaaaactcctgcactttt
agggagtttgtgcctattgtgaaaggagctaacagggatgatgcaaataaatcttatgtc
actgttgaatccaaaggcaatcaagagccagataaactggatactaagcagtcatttcag
gatgctagttcatgtaatagcctggatatggaaaactctttcccatcaaaagaaaaattg
acacatggagaaaaacttgatgagccaaatcagccagatgaagtgttcacagaaaatgat
atgcaaggtgtacagagttgtccaaggcatgtgcccgtgcatatacttgatgggagctta
gggatgaatactaataatacccaagatatgacgtatcacgagtctattgttcaccaaatt
ggcggagtccaagggcatttgaatcagttcacacatcatgcctcatctaacacatctgag
catcaaagtaatccttccaggtcttccattcaccatatgtttcctagtttccacccaatg
atgaactcaaattgcgactccaatgattacagatcatgcctgcatatctcttctacattt
tcaagtctaattgtttctgctttgttgcaaaatccagcagctcatgctgctgcaagcttt
gcagctagcttttggccctatgcggcaaactttgaagctccaacagactcttgcacgggc
acccctggtggagttccatcaaggcagatgaattcagtgcctagtatggctgcaattgcc
gctgctactgtagctgcagcaactgcatggtgggctgcacatggtcttcttccactatgt
tctccacttcacacatgctttacctgccctacatcgtcaggaactgcagtcccaatggat
gcctgtcaaactaaggtagcaaataatgagagaaaggatgggactcctgatccgtctttg
catgttcaacaactggacccaggatgcactgaaacgttgcgagaacaactttcagcttct
aagccaccagttttgtgttcatcagactctgaggaaagtgatggcatgaaagttaatacg
acagttactgttactgacactgaacaggcagcaatagtcactgagcttaatgattccaat
acaactaagaatagaaaacaggttgaccggtcttcatgtggatctaacacaccctcgagc
agtgaagttgagacagatgctttggaaaagattgaaaaagataaagaagatccaaaagaa
tctcctcatgtcaaccatacacccacacccacagagtctggtaacagacgaggaaagaac
tccagcaatccaaatgacccttggaaggaagtctctgaggagggacgaatcgcttttcgg
gctcttttctcgagagaagtattaccccaaagcttttctcccccccatgatcttaatagc
aaggtaaagaaaaacagcgagaaaggcaagctaaaaggtgaacaaaatgaggaggatcaa
aagggattacagttagaggtgaatgataagtcatcaattacatgttccattcattatggt
aataaagacagagaaccatcatcatgttttgggggtggaaacaacacactgacgatgaaa
cttggagaggggaagctgaaagcatgccgaacaggattcaaaccttacaagcgatgctca
gtggaagctaaagagagcaggataggaggaagtagtacgagctgtcaagatgaagagaaa
ggtcccaagaggcttcgcttgggaggaggggagacttcaacttaa
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