Ipomoea triloba (trilobed morning glory): 115997874
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Entry
115997874 CDS
T07384
Name
(RefSeq) SNW/SKI-interacting protein A isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115997874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
115997874
Spliceosome [BR:
itr03041
]
Complex B
Other components
Prp19-related factors
115997874
Complex C
115997874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
115997874
NCBI-ProteinID:
XP_031093152
LinkDB
All DBs
Position
12:22550017..22553001
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AA seq
623 aa
AA seq
DB search
MVLHFPGLNSGFIVQDLVLLKVFASNMATLRDLLPAVKSSSAAHYDHTNDPWFKNRYSGA
EEEKTAVIKANPVPPYMKRAGFRPSKLEDFGDGGAFPEIHYAQYPLDMGRKKDWKPANKT
LPVTVDEHGDVRYDAIVKQNENSKKIVYSQHKDLIPKVVKDENDEEMDSDEMQKLIEDTT
METKAALEKIVNVRLSAAQPKNVPTQSSDSKFIKYKPSQQSAAFNSGAKERIIRMVEMPV
DPLEPPKFKHKRVPKASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLD
KRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVAMRSKVQKEMMMKEKERKEMELR
ELARKARSERTGVAHTGAAPAPSERGTVNDDMNADYDHVRDVPKESREERDEKSQRDKIR
EERRRERERERRLEAKDAAMGKKSKITRDRDRDVSEKMALGMASTGGTRGEVMYDQRLFN
QEKGMESGFATDDAYNIYDKGLFTAQPTLSTLYRPKKDADAEMYGGADEQLDKIMKTDRF
KPDKGFAGASERAGPRDRPVEFEKEAEEADPFGLDQFLTEVKKGKKAMDKVGSGGTMKAS
AGSTRDGYEGGSSRSRINFERGR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggttttacattttccagggctcaattctgggtttatagttcaggatttggtgctgctt
aaagtctttgcctccaacatggctactctgagggaccttctacccgcagtgaagtcaagt
agtgctgcgcattatgaccacacaaatgatccatggtttaagaacaggtatagtggtgct
gaggaagagaaaactgcagttatcaaagcaaacccagtgcccccttatatgaaaagggct
ggatttaggccatctaagcttgaggattttggggatggaggtgcattccctgaaattcat
tatgcacagtatcctcttgatatggggagaaagaaggactggaaacctgctaacaagaca
ttacctgttactgttgatgagcatggtgatgtgagatatgatgcaattgtgaagcagaat
gaaaattcaaagaaaattgtgtattctcagcataaagaccttattcccaaggttgtgaaa
gatgaaaacgatgaagagatggacagtgatgagatgcagaagttaattgaggacaccacc
atggagacgaaagcagcccttgagaagattgtgaatgtgaggttgagtgctgcacagccc
aaaaatgttcccacacaatcttcagactctaagtttattaaatacaagccatcacaacaa
tcagcagcttttaactcaggtgcaaaggagaggatcattaggatggtggaaatgcctgtg
gaccctttggagccaccaaagttcaaacacaaaagggtaccaaaggcttctggctctcct
cctgtgcctgttatgcattctcctcctcgtcccgtgactgtgaaggaccaacaagactgg
aagattcctccttgtatttccaactggaagaatccaaaaggttatacaattccacttgac
aagcgtcttgctgctgatggtaggggacttcaggaggtccagatcaatgacaattttgca
aaattgtcagaggctttatatgttgctgaacagaaggctagagaagcagttgctatgcgg
tcaaaggtgcagaaggagatgatgatgaaggagaaagaaagaaaggaaatggaacttcgt
gaattggcccgaaaggcgagatctgaaagaacaggtgttgcgcatacaggtgctgctccc
gcaccttctgaaaggggtactgtgaatgatgacatgaatgcggattatgaccatgtccgg
gatgtaccaaaagagagcagagaggaaagggatgagaaatcacagagagacaagattcgt
gaagagaggcgtcgggaaagggagagggagcgaaggttggaggctaaagatgctgcaatg
ggcaagaagagtaagattacaagggacagggaccgcgatgttagtgagaaaatggccctt
ggtatggcctcaaccggtggcacaagaggagaggtcatgtatgatcagaggctatttaac
caggagaaggggatggaatccggatttgccactgatgatgcatataatatttatgacaag
ggtctctttactgcccaacctacgctctctactctctacagaccaaagaaagatgccgat
gctgagatgtatggtggtgcagatgagcaactggataagattatgaaaacagaccggttt
aaacccgacaagggatttgctggagcctctgagagggctggtcctagagataggcctgta
gagtttgagaaggaggctgaggaggcagatccatttgggttagaccagttcttaactgag
gtcaagaagggtaaaaaagccatggacaaagtaggcagcggaggtaccatgaaggccagt
gccggctccactcgagatggctatgaaggaggatcaagtagatcaaggattaactttgag
agggggcgttaa
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