Ipomoea triloba (trilobed morning glory): 115997986
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Entry
115997986 CDS
T07384
Name
(RefSeq) putative uncharacterized protein DDB_G0274405 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115997986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
115997986
03019 Messenger RNA biogenesis [BR:
itr03019
]
115997986
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115997986
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115997986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
115997986
NCBI-ProteinID:
XP_031093287
LinkDB
All DBs
Position
12:complement(7348332..7359397)
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AA seq
592 aa
AA seq
DB search
MFPPHNSQSRPSSQLHSNGLPASAPPPPPAQVMSNPGMQIQPPPFNPQGLITPNTHPRFP
FQGPQNPNNQINNVFPQMPGQFFPQNAVNPAQFFNPNGNFGLPNGQCNLPNNNLMQTVNQ
LLQLQMQLQMQMQMPNFAQGIGMPGIPGVGVQNPAFTGNSQFTQQPMNGNFLNQSQQGNA
PPMNAFGMVPQPHLNQSSLNHPDAAKSQGDLGQAARGDTKGNWKSSPNNNFKRNQRHDAP
HTGFRKAVPQSVQNAKRNFNNHNDSLRKAHSKGGPENSPKKQNQNEKKRPLPLLYTEKEI
QQWREDRRKNYPSKANIEKKSQKLAGTEDNANAAKLRRQQLKEILAKQAELGCEIAEIPS
SYLSDLERPGHERENRRPFRKNEKFQYKSNKRGRFGQKNQFSKKQKFEDPSSSNIQEQND
NNSREQKLEKSGSASQSKRKPTLLQKLLGADIRRDKQHLLQVFRFMVMNSFFTECPEKPL
KFPSVIVKESENQNVASEQASPPLKSPSLIVREPGNQNVAIEQASPPLKSPSLIARESGN
QNVAIEQAFPIEEPFNDDNDEDKKFKELDDLLYQNVGHTEEEENQEEGEIID
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgcctcacaattctcagtctcgcccttcttctcaactccactctaatggactc
cctgcttctgctcctcctcctcctcctgcacaggttatgagcaacccaggaatgcaaatt
cagcctccgcctttcaacccgcagggtttaatcactccaaatacgcatccacgtttcccg
tttcaaggtcctcaaaacccaaacaaccaaatcaataatgttttccctcaaatgcctgga
cagttttttcctcaaaatgcagtaaacccggctcagttcttcaatccgaatggtaacttt
gggttgccaaacggccagtgtaatttgcctaataacaacctgatgcaaactgtgaatcag
ttattgcaactccaaatgcaattgcaaatgcaaatgcagatgcctaattttgctcaggga
attggtatgcctggcattccaggggttggtgtgcaaaatccagcttttactgggaattcg
cagtttacacagcaaccaatgaatgggaattttttgaatcaatctcaacaagggaatgca
cctcccatgaatgcttttggcatggtgccccagcctcatctaaaccagagcagcttaaat
catcctgatgctgctaagtcacagggagatcttggacaagcagccagaggcgatacaaaa
ggaaactggaaaagttctccgaacaacaacttcaagagaaaccagagacatgatgcacca
catactggatttaggaaggccgtgcctcagtctgttcaaaatgctaaaagaaacttcaac
aatcataatgatagcctaagaaaagcacacagtaaaggtgggcctgaaaattctcccaag
aaacaaaatcaaaatgagaaaaagaggccactccctttgttatacactgagaaagaaata
caacaatggagggaagaccgaaggaaaaattatccttcaaaagccaacattgagaagaag
tcgcaaaaattggctgggactgaagacaatgcaaatgctgcaaaattgcgccgccagcaa
ctcaaggaaattttggctaagcaagcagagctaggttgtgaaattgcagaaataccatct
tcctatctgtcagacttggagagaccaggccatgaaagggagaacagaaggccattccgt
aagaatgaaaagttccaatacaaatcaaacaaaaggggacgatttggtcaaaagaatcag
ttctccaaaaagcaaaaatttgaggaccccagttcatccaacattcaagagcagaatgac
aacaactcaagggaacagaagttggaaaaaagtggctcagcttcacagagcaaaaggaaa
ccaactcttttgcaaaagctgctgggtgcagacattagaagagataagcagcatctattg
caagtttttaggttcatggttatgaattctttcttcacagaatgccctgagaagcctctg
aaatttccatcggtgattgttaaagaatcagagaatcagaatgtggcttctgaacaagca
tccccgcctctgaaatctccatctcttattgttcgagaaccagggaatcagaatgtggcc
attgaacaagcatccccacctctgaaatctccatctctgattgctagagaatcagggaat
cagaatgtggccattgaacaagcattccctattgaagaaccgttcaatgacgacaatgat
gaggacaagaaattcaaagaactggatgatttactttatcagaacgttggtcacaccgaa
gaggaagaaaaccaagaggaaggagaaatcattgattag
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