Ipomoea triloba (trilobed morning glory): 115998059
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Entry
115998059 CDS
T07384
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03440
Homologous recombination
itr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115998059
03460 Fanconi anemia pathway
115998059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
115998059
03400 DNA repair and recombination proteins [BR:
itr03400
]
115998059
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115998059
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Topoisomerases
115998059
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115998059
FA (Fanconi anemia) pathway
115998059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Toprim_4
Motif
Other DBs
NCBI-GeneID:
115998059
NCBI-ProteinID:
XP_031093379
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Position
12:27978819..27995915
Genome browser
AA seq
920 aa
AA seq
DB search
MAVRVLNVAEKPSVAKAVAGILSNNQMRSRNGRSVYNRIFEFNYIILNQPCQMLFTSVTG
HLMELEFDDRYRKWHSCDPVDLFSAPVRKSVPEDKLDIKRTLEEESRKCQWLILWLDCDR
EGENIAFEVLEICKQANRNLRVWRARFSALIDREIRQSVERLVQPNQLFSDAVDVRQEID
LRIGASFTRFQTMLLRDTFVIDSAPDDRNLVLSYGPCQFPTLGFVVERYWEIQAHEPEEF
WTINCTHTSDEGTANFNWMRGNLFDHTCAVIIYEMCVQEPTATVTKVRQQEKLKYPPHPL
NTIELEKRASRYFRMSSAQTMKVAEDLYQQGFISYPRTETDRFSVDGIANLPMIVQEQGG
HPVWGSYAQRLLDRESGLWRDPSGGVNDDKAHPPIHPTRFSAGEPGWSQDHHKVYELVVR
HFLACVSQPAKGAETIVEIDIAGESFSACGRVIIAKNYLDVYRYESWGGSVIPTYSFGQQ
FTPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCYVTKDSNTRF
SPTKLGEALVMGYDDMGYELWKPYLRSMMEHDMKAVSIGTKGKTEVLETCLQQMKACFLD
ARVNKVKLFEAMAVFFDRSNRSNASEQHIVGDVVRRCGLCQESDMVLRQKTDGKFMVGCL
GYPQCRNAVWLPGCILEAVVTQDICSICTPGPVFKIRFKFRRLSIPPNFDAEHLGCVGGC
DDTLKQLAEICGTGSRNTRGGHTTPSASAQRSNPRPQASCLYCRQTGHSSNDCPSQASNR
RSAQSQFQSHEANRQNGVPSIPCNSCGAPCALRTANTAKNRGRKFYSCQSRECNFFVWEE
DGVSRGGGAPSENTSDLGSNSGRGGRGRGRGRGRGRGRGGATATHANGFTFVSATGEPTT
GCCFVCGDPSHLANVCPSRR
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggccgtaagggtgctgaatgtggcggagaagccgtctgtggcgaaggcggtggcggga
atactgtcgaacaaccaaatgaggtcgaggaacggtcggtcggtgtacaacagaatattt
gagtttaactacatcatcctaaaccagccctgccaaatgctcttcacttcagtcacgggg
cacctcatggagctcgaattcgatgatcgataccgcaagtggcactcctgcgatcctgtc
gatctctttagcgcccccgttcggaaatctgtcccggaggataagttagatatcaaaagg
acactggaggaagagtctcgaaaatgccaatggcttatactatggcttgattgtgatagg
gaaggggaaaatattgcattcgaggtgttggaaatctgtaaacaagctaatcgtaacctt
agagtgtggagggctcgtttctctgctctgattgacagggaaattcgccagtctgtggag
cgacttgttcaacccaatcaattgttttctgatgctgttgatgtacgacaagagatagat
cttcgtataggtgcttctttcacaagatttcagactatgctcttgagagatacatttgtc
attgattctgctccggatgacagaaatcttgtcctgagttatggtccttgccagttccct
actcttggtttcgtggttgagcggtactgggagatacaagctcacgaacctgaagagttc
tggacaatcaattgtactcacacttcagatgagggcactgcaaactttaattggatgcgt
gggaatttgtttgatcacacatgtgcagtaattatttatgaaatgtgtgtccaggaaccc
actgcaacagtcactaaagttaggcagcaggagaagctgaaatatcctccacacccgttg
aacaccattgagctcgagaaacgtgcatcaagatatttcagaatgagttctgcacaaact
atgaaggtggctgaggatctttaccaacaaggatttattagttacccacgcactgagact
gatcgcttctctgttgatggcattgctaacttgcctatgattgttcaagaacaaggtggt
cacccagtatggggctcttatgcccagcgcttgttggaccgtgaatcaggactgtggaga
gaccctagtggtggagtgaatgatgacaaggcccatcctcctattcacccaactaggttt
tcagctggagaacctggatggagtcaggaccaccataaagtgtatgaacttgttgttcgc
cattttctggcctgtgtctctcaaccagccaaaggagctgagaccatagttgaaattgat
attgctggtgaatcattttcagcatgtgggagagtgataattgctaaaaactacttggat
gtctacagatatgaatcatgggggggttcagtgatcccaacatacagttttgggcagcag
tttaccccaacaacattgactcttgattcaggagttacgcgacctcctccacttttgagt
gaggctgatcttctaagttgcatggacaaggcaggcattggcacagatgcaacgatgcat
gatcacataaaaaaactgcttgatcgatgttatgtgactaaagattcaaacacccgtttc
tcaccaactaaacttggggaagctctggtaatgggatatgatgacatgggttatgaactg
tggaaaccatatctccgttcaatgatggaacatgatatgaaagcagttagtattggcaca
aagggaaaaactgaggttttggagacctgcttgcagcaaatgaaagcttgctttctagat
gccagagtaaacaaagtaaaattatttgaggcaatggctgtgttctttgacagatcaaac
agatccaacgctagtgagcaacatatagttggagatgttgttcgcagatgtggactttgt
caggaatcagatatggtcctcaggcagaaaacggatggaaaattcatggttggttgcctg
ggttatccacagtgtagaaatgcagtctggctaccagggtgcatattagaagcagttgta
acccaagatatatgcagcatctgcactccaggacctgtttttaagattcggtttaaattt
cgacgtctatctataccacccaatttcgatgctgaacatttaggttgtgttggtggctgt
gatgatactctgaagcagttggcagaaatttgtggaactggttcccggaatactagaggg
ggccatacaacaccttccgctagtgcccagcgaagcaatcctagaccgcaagcttcttgt
ttatactgtaggcaaacagggcattcatcaaatgattgcccctcgcaagcatccaatcgg
cgttctgctcagtcccagttccagtcccatgaagctaaccgacaaaatggggtaccatcc
attccttgtaattcctgcggtgctccctgtgctctacgaaccgccaacactgcaaaaaat
aggggcagaaagttctactcttgccagtcccgagaatgcaattttttcgtatgggaggaa
gatggcgtgagcagaggaggaggagccccctccgaaaatactagcgacttggggtctaat
tccgggaggggtgggcgcggacgaggccggggccgtggtagaggcaggggcaggggtggt
gccactgccacacatgctaatggttttaccttcgtatcggcaacaggggaaccaaccacc
ggttgctgttttgtatgtggtgatccatcgcacttagcgaatgtttgcccaagtcgtcgc
tga
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