Ipomoea triloba (trilobed morning glory): 115998179
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Entry
115998179 CDS
T07384
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03440
Homologous recombination
itr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115998179
03460 Fanconi anemia pathway
115998179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
115998179
03400 DNA repair and recombination proteins [BR:
itr03400
]
115998179
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115998179
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115998179
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115998179
Bloom's syndrome complex (BTR)
115998179
FA (Fanconi anemia) pathway
115998179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-GeneID:
115998179
NCBI-ProteinID:
XP_031093528
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All DBs
Position
12:complement(23621404..23627857)
Genome browser
AA seq
726 aa
AA seq
DB search
MKKSPLPLKNICGPEKKSIGKEALVKLLRWHFGYANFRGKQLEAIEAVLSGRDCFCLMPT
GGGKSMCYQIPALAKPGIVLVVSPLIALMENQVSALKEKGISAEFLSSTQTSQVKTKIYE
DIESVKPKLRLLYVTPELIDTVGFMSRLVKIHSRGLLNLIAIDEAHCISSWGHDFRPSYR
KLSSLRSRLPNIPVLALTATAAPKVQKDIIGSLSLQSPLVLKSSFNRPNIYYEVRYKDLL
DDPYADVCNLLKSCGNVCAIVYCLERTTCDDLASHLTTYGISCAAYHAGLNNKLRTSVLD
DWISSKTQVVVATVAFGMGIDRKDVRVVCHFNTPKSMEAFYQESGRAGRDQLPSRSVLYY
GVDDRRKMEFILSNSERKKQSSSLQDGSSKKALDNFRQMVEYCEESGCRRKKILESFGEM
VSASLCEKSCDACKQPNIVAKNLEELKTAAAFCQRNGSSRIFITSLSNFKDGDYSEFWNH
GDEASGSEEDISDSDDCMNTEALDAAKNVASTGRSTKLRIQDKIEMLQRAEEKYYQNKNP
EKQVNKLDKNAIPETLRETGRQRLLNTLKQNEKRFSDLRMSFEDSASILENECYKKYSKS
GKSFYLSKMASTVRWLSTADPTELTNKLGCAPDPPKDLQQPSEANCSSESLTSSIALSAG
LNNEKTNSAVLETEAAENVSPATTLPPIPSFSEYINSRKVKSHHESKSKKRLPDMSQKNI
QKKMRS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcaccattgccactgaaaaacatatgtggacctgagaagaagtccattggg
aaggaagctttggtgaagctattgagatggcattttgggtatgccaacttccgggggaag
caattagaagctattgaagctgttttatcaggaagggattgcttttgcttaatgcctacc
ggtgggggaaaatcaatgtgctaccagattcctgctcttgcaaagcctgggattgtactt
gttgttagccctttaatagctctcatggagaatcaagtttcggcattgaaagaaaaagga
atttcagctgagtttctctcatcaactcagacttctcaagtaaaaactaagatatacgag
gacattgaatctgtgaagccgaaactgaggttattgtatgtgacaccagaactaattgat
actgttggattcatgtcaagactggtgaaaattcactcaagaggattgctaaatcttatt
gctattgatgaggcacattgcatctcttcatggggccatgatttcaggcctagctaccgg
aagctttcttccttgaggagccgcctaccaaacataccagtgttggctttgacagcaact
gctgctcctaaagttcagaaagatataataggatcgttgtccttgcagagccctctagtt
ctgaagtcatctttcaaccgcccaaatatctattatgaagttagatataaagatcttttg
gatgatccatatgctgatgtctgtaatctacttaaatcttgcggaaatgtctgtgcaatc
gtttactgcctcgaacgtacaacttgtgatgatcttgccagccatctgaccacatatggc
atttcttgtgctgcatatcatgctggcttaaataataaactgcggacctctgtcttggat
gactggatttcctccaaaacacaagtagttgtggcaacagtggcttttgggatgggcata
gaccgaaaggatgtcagagttgtctgccacttcaatactcctaagtcaatggaagctttc
tatcaggaatcaggtagagctggtcgtgatcaattgccctccagaagtgtcttgtattat
ggagtggatgaccgtcgaaaaatggaatttattttaagcaattctgaaagaaagaaacag
tcttcaagtttacaagatggttcctcaaagaaggcacttgataacttcagacagatggtt
gagtattgtgaagaatctggttgtcgccgaaaaaagatacttgagagctttggggagatg
gtatctgcatctttatgtgaaaaatcatgtgatgcttgcaaacagcccaatattgttgct
aaaaacttggaggagcttaaaactgctgccgcattttgccaacgaaatggatcttcacgg
atatttataaccagcttatcaaacttcaaggatggagactactctgaattctggaatcat
ggtgatgaggcaagcgggtcagaagaagatatatctgattcagacgattgcatgaataca
gaagctcttgatgctgcaaagaatgtagcatcaacaggaagatcaacaaaattaagaatt
caagacaaaattgaaatgctgcaacgcgcagaagagaaatattatcagaacaaaaatcct
gagaagcaggtaaataaacttgacaaaaatgcaatacctgaaacattaagagagactggc
agacaaagattgttaaacacattaaaacaaaacgagaagcggttctctgatttaaggatg
agcttcgaagattctgcctcgattcttgaaaatgaatgttacaagaagtacagtaaaagc
gggaagtccttttatttatctaaaatggcaagtacagtaaggtggctctcaacagcagac
ccaacagaactaacaaataagctcggctgtgctcctgatcctcccaaggatctacaacaa
ccttcagaagcgaactgttcttcagaatcactgacttcatcaatcgcattatcagcagga
ttgaataacgagaaaaccaacagcgctgttttagaaacagaagcagctgaaaatgtctcc
cctgctacaacattgccaccaatcccatctttctccgagtatattaacagtagaaaagtg
aagagccaccatgaatccaaatcaaaaaagcgtttacctgatatgtcccaaaagaatata
caaaagaaaatgcgatcttaa
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