Ipomoea triloba (trilobed morning glory): 115998245
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Entry
115998245 CDS
T07384
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
115998245
Spliceosome [BR:
itr03041
]
Common components
Common spliceosomal components
General mRNP proteins
115998245
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GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
115998245
NCBI-ProteinID:
XP_031093609
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Position
12:complement(28243848..28250359)
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AA seq
601 aa
AA seq
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MAMDFDEYDYLEKAVEETNGPSSKSKDKDRENSSSEKEKSEKSYRRRERDESDDLADEDG
RDRKSSKRSRGGDEENGREKDRDRERDRDKERSSRHKSRERESDRDKERSSRDREKREKD
KERDRDRDKDRDRERRDRDKEKERERERRERDREKERERERRSRSRSRLDRERERELMRE
RERELELRDSRRFKEKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSQAGKVLAD
TAKYLCDSATILGFMVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLLGQPV
MVKPSEAEKNLVQSNTAAGGAGVTGPYAASERKLYVGNLHFNMTELQLKQIFEAFGPVEL
VQLPTDPETGHCKGFGFVQFAQLEHAKAAQSLNGKLEIAGRTIKVSSVTEHVGVQDSAAK
TADFDDDEGGGLALNAQSRAMLMQKLDRSGIASSITGSLGVAGLNGAAPSQAAISLPIGG
APAIPAPILPAQVVAAMVPEPIGNPSECLLLKNMFDPAMETDPEFDLDIRDDVHEECSKY
GAVKHIHVDKNSAGYVYLRFDSVESASRAQQAMHKRWFARRSVSAIFLQPYEYDAKFKGA
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggacttcgacgagtatgattatctggagaaggccgttgaagagaccaacggt
ccatcttcgaagagcaaggacaaagacagagaaaacagctcatccgagaaggagaagagc
gagaaaagctaccggaggagggaaagggacgagagcgacgatttagccgatgaggacggc
agagatcgcaagagcagtaaaagatctcgcggcggagatgaagagaacgggagggagaag
gatagagaccgggaaagggatagagataaggagaggtcgtcgcggcataaaagtcgggag
agagagtccgacagagacaaagagaggagttcaagggatagggagaagagagaaaaggat
aaggagagggatagggatagagataaggatagggatagggagaggagagaccgggacaag
gagaaggagagggaacgggagaggagagagagggacagggagaaggaaagggagagggag
aggaggagccgcagtcgctcgaggctcgatcgtgaaagagagagggaactgatgagagag
cgagagcgtgagcttgaattaagagatagcaggcggtttaaggaaaagaaggaggcagca
gagccagaggctgatccagaaagagatcaaagaactgtttttgcttatcagatgcccctg
aaggcaactgaaagggatgtgtatgagttcttctcacaagctggaaaggtccttgctgac
acggcaaaatatctctgcgactctgctacaattttaggtttcatggtgagggatgtacgt
ctgatcatggaccgaaattcaaggagatcgaaaggagttgggtatattgaattttatgat
gccatgtctgtcccaatggccattgccttatctggacacttactgcttgggcagcctgtt
atggttaaaccttcagaagctgaaaagaatcttgttcaatcaaatactgctgctggtgga
gcaggtgttactggaccatatgctgcctcagaaaggaaattgtatgttggaaatctgcac
ttcaacatgacagaattacagcttaaacagatttttgaagcttttggtccagttgagctt
gtgcagctacctaccgatccagaaacaggacattgcaaaggttttggctttgttcaattt
gctcaacttgaacatgctaaggcagcacagagtttgaatggaaaactggagattgctggt
cgaacaatcaaggtttcatctgttactgaacatgttggggtacaagattcagcagccaaa
actgcagattttgatgatgatgaagggggtggactggcattaaatgcacagtcaagagca
atgctgatgcagaagttggatcggagtggcatagcctccagtattacgggttcacttggg
gtggctgggcttaatggtgcagctccatcccaggcagctattagcttgccaattggtggg
gcacctgctattcctgccccaatccttccagctcaagttgttgctgccatggttcctgaa
cccattgggaatcccagtgagtgtttgctgttgaagaatatgtttgatccagctatggag
actgatccagagttcgatttagacattagggatgatgtacatgaagaatgttccaagtat
ggtgctgtcaaacatattcacgtggacaagaatagtgctggatatgtttatctgcgattt
gatagtgtggagtctgcatctcgtgctcaacaagcaatgcataaaagatggtttgctcgc
agatcagtttcagccatctttttgcaaccatacgagtatgatgccaagttcaaaggtgca
gcttga
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