Ipomoea triloba (trilobed morning glory): 115998324
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Entry
115998324 CDS
T07384
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115998324
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115998324
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115998324
NCBI-ProteinID:
XP_031093723
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Position
12:6005099..6007970
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AA seq
408 aa
AA seq
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MANLLFSSPLLLPLFLLLVSSTPDHHQDPDAIVQDVNRKINNASLARRGLGYLSCSTGNP
IDDCWRCDPNWEKNRQRLADCAIGFGKDALGGKNGRVYVVTDSGDDDPVNPKPGTLRHAV
IQDEPLWITFQRDMVIQLKQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHV
HDCKPAGNGDIRDSPEHSGWWDGSDGDGISIFQGKHIWVDHCSLSNCHDGLVDAIHGSTA
ITISNNYFTHHDKVMLLGHSDAYTLDKNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWELYAIGGSASPTINSQGNRFLASDDRFRKEVTKHEDAAESEWKSWNWRSEGDLMLN
GAYFRQSGAGASASTYARASSLSARPSSLVASITTAAGALNCKKGSHC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatctcctgttctcctcacctcttctactcccattattcctcctcctcgtttct
tccacgcccgatcatcaccaagaccccgatgcaatcgtccaagacgtaaacagaaagatc
aataacgcgtctctggctagacggggtctgggctacctgtcatgctcgaccggcaacccg
atcgacgattgctggcggtgcgatcccaactgggagaaaaaccgccagcgcctcgcggac
tgcgcgatcgggttcggcaaggacgcgctgggcggcaagaacgggcgggtttacgtggtc
accgattccggggacgatgaccccgtgaacccgaagcccgggacgcttaggcacgcggtt
atccaggacgagccgctttggataacgttccagcgggatatggttatccagctgaagcaa
gagctagtgatgaactcgtacaagaccatagacgggcgaggggctagcgtgcacattgcg
ggcgggccgtgcattacgattcactatgcgactaatattattattcatgggattcatgtc
cacgattgtaagcccgcggggaatggggatattagggactcgcccgagcattctgggtgg
tgggatgggtcggatggggatgggatttctatctttcaagggaagcatatttgggtggac
cattgctcgctctccaattgccatgatgggcttgtggatgcgattcatggttccaccgct
attaccatttctaataactacttcactcatcatgacaaggtcatgctcttgggtcatagt
gatgcctatactcttgacaagaacatgcaggtcaccgttgcctttaatcattttggcgag
gggctggtccaaagaatgcctaggtgtcggcatgggtatttccacgtggtgaacaatgac
tatactcactgggaattgtatgccattggcggcagtgcatcccctactataaatagccaa
ggcaacaggtttcttgcatcagatgatagatttcgtaaagaggtgacaaagcacgaggat
gcggcggaaagcgaatggaaaagctggaactggcgatcagaaggggacttgatgttaaac
ggtgcgtatttccggcagtccggtgcaggggcttccgcctcaacctacgccagggcttcc
agcttaagcgccaggccgtcgtctctcgtggcttctatcaccactgccgctggtgcactt
aactgcaagaaaggatcccactgctaa
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