Ipomoea triloba (trilobed morning glory): 115998375
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Entry
115998375 CDS
T07384
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115998375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
115998375
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
115998375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
115998375
NCBI-ProteinID:
XP_031093798
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Position
12:complement(684681..704049)
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AA seq
1178 aa
AA seq
DB search
MRSIAKLPEAVHSSIRSGIVLYDLTRVVEELVYNSLDAGANKVSVAVGVGTCYVKVVDNG
YGVSRDGLELLGEKYATSKYDPLDDMNSVPLSFGYRGEALSSITDVSLVEIVTKAHGRPN
GYRKVLKGHKCLYLGISDDRQDVGTTVTVRDLFYNQPVRRKHMLSNPKKVIHVVKECVLR
IALLHPNVSFKVVDIESEEELLHTCPFPSSLPLLAKVFGIEASSSLEELNVAGGGFKLSG
YISGTPDSFSWKAFQYVYINSRFICKGPIHKMLNNLAASFNIGSQSEKQSRSQICPAFIL
NLNCPKSCYDLTFEPSKTSVEFKDWDSVLTFIGDAVGCLWSGSKSADLSVKCEIGKKRRR
ALNSMGSQGTSPQSKKVTEECNNFHPSRENESPSHCGVVISLECSSGLSPLPHNVFSYGD
NDLLGLNRSNKQLNYTFSSGWKSESPKIGVGTNRLLTDHMKFNKSPQLDDNSDVDEDVRK
PFLQSCFLHRRLEPGETSLASDEGLEFKIEDHSKQNAFRADDRVVEEVNNINKVMSPRNV
WDNEQADVLSFSKTTIQHDVQHQLNLLLGDSVNSSLNPELSYEEGLFLPDVIKPFQRSNS
CLYSDSCISSPVPSNYLTGIPFKNIAHTISEDLVATCLEYKGNVRYDYLANKERKNWRYD
IDKISIDPGKEECFFSSSKTLSSDVNDCGGSKENSSDFQEHDLYDPFSPMELSTDFQDHN
QKDVFSPNSFNIFTDCINTWGEDGITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPS
RRGRRSNSAPPLYRGRKKFLALSDSLTMTTGKVNLQTVHHCPGFPGSNNMKQILPSEVNG
VNSSFSDDIPDVRIMKGDKGKGNNKCNIDSFEEFIPKEIQDPLDSGEKWQNSHPHLTSGS
RLLHPKNQDAILDIASGILHLAGDSLIPRSLDKNCLESAKVLQQVDKKFIPIVASRTLAL
IDQHAADERIRLEELRRKVLSGELRRTNYLDSEQELFMPEIGFQLLHDYAEQIQNWGWIC
NVHSQGSRSFTRDLNIMHKQQAIATLLAVPCILGVNLSDVDLLEFLQQLADTDGSSTVPP
SVHRVLNNKACRGAIMFGDALLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLDALSE
QIAKITSWSSSSCESWHGLRRHEISLQRTAQRLSSATH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcattgcgaagttacctgaggctgttcacagctcgatccgttctggaatcgtc
ctgtatgacttgacaagggtcgtggaggagttggtgtataacagcctcgatgctggtgct
aacaaggtttccgttgctgtgggtgttgggacctgctatgttaaagtggtagacaatgga
tatggtgtttcccgagatgggttggagctgctgggagaaaaatatgcaacatcaaaatac
gaccccttggatgatatgaactccgttcctttaagctttggctaccgtggggaggcttta
agctccattactgatgtctctttggtggaaattgttacaaaagctcatgggaggccaaat
ggatatcgcaaggttttgaagggccacaagtgtttgtatcttggaattagtgatgataga
caagatgtaggcacaacagtcactgtgcgtgatttattttacaaccaaccagtccgaagg
aagcatatgctatccaacccaaagaaagtcatacatgtagttaaagagtgtgtgctaaga
attgcacttcttcatcccaatgtctctttcaaagtagttgatattgaaagtgaagaagag
ctgctccacacatgtccctttccttcttcattgccactactagcaaaagtttttgggatt
gaggcttccagttctcttgaagaattgaatgttgctggtggtggattcaagctttctggg
tatatttctggcacccctgatagtttttcatggaaggcctttcaatatgtctatatcaat
tcaagatttatttgtaaaggaccaatacataaaatgctaaataatttggcagcaagcttt
aacattggttcccaaagtgagaagcagagtagatcccagatatgtccagcattcattttg
aacctaaactgcccaaaatcttgctatgatctgacatttgaaccatcaaagacctctgtg
gagtttaaggattgggactctgtgcttactttcattggggatgctgttggatgtctctgg
agtggaagtaaatctgctgatttgtctgtgaaatgtgaaattgggaaaaagaggcgtagg
gccttgaattctatgggttctcaggggacttctccacaatcaaagaaggtaactgaagag
tgcaataatttccaccccagcagagagaatgaatctccatcacattgcggagtagtaata
agccttgaatgcagcagtggtctatctccattgccccataatgtgttctcttatggggac
aatgatcttcttggtctaaatagatccaacaaacaattgaactatacttttagttcagga
tggaagagtgaatctcccaagattggtgttggcacaaataggttacttacagaccatatg
aaatttaataagtctcctcaacttgatgacaattcagatgtcgacgaggatgtaagaaaa
ccctttcttcagagttgttttttacacagaagactggaacctggtgaaacatctcttgct
tctgatgaaggacttgagtttaaaattgaggatcactccaagcaaaatgcatttagagct
gatgatagggttgttgaagaagttaataatattaacaaagttatgagtccaaggaatgta
tgggacaatgaacaagcagatgttctgagcttttccaagactactatacaacatgatgta
caacaccagctaaatttgttgcttggagattcagtaaattcatcattgaaccctgagctt
tcttatgaagaggggctctttttacctgacgtcatcaagccatttcaaagatctaattct
tgcctttattctgatagttgcatttcatctcctgtgccatcaaattatttgactgggata
ccattcaaaaacatagctcacaccattagtgaagatttggttgcaacttgtcttgagtat
aaaggtaatgtgagatatgattatttggccaacaaagaaagaaagaattggagatatgac
atcgacaaaatctcaattgatccaggaaaagaggagtgcttcttttcaagctctaagaca
ctttcctctgatgtcaatgattgtggtggttccaaggagaacagtagtgacttccaagaa
catgatctgtatgatcctttctctccaatggaactaagtactgacttccaagatcataat
cagaaggatgtgttctctccaaatagtttcaatatttttactgattgcataaacacttgg
ggtgaagatggtattacaaattgctctacttcaaggcaccacgcctcttccattggtttt
gattgcgactcatgcacaagggtccatcctagaaatctaagtaaaatgtttgatccctct
aggagaggtagaagaagcaattcagctcctccactttacagaggcaggaagaagttcctt
gccttgagtgattccttgacaatgacaacaggaaaggttaatctgcagaccgtccatcat
tgccctggttttccaggatcaaacaacatgaagcaaatactcccttcagaagtaaacggt
gtgaatagttcattctcagatgacatacctgatgtgaggatcatgaaaggtgataagggg
aaaggcaacaacaagtgcaacattgattcctttgaagagttcataccaaaggagattcaa
gatcctctagattctggagaaaaatggcagaacagccatccgcatcttacaagtggaagt
agattacttcatcctaagaatcaggatgctatacttgatatagcttctggcatcttgcac
cttgctggagattcattaatccctcgttccttggacaaaaactgcttggagagtgccaaa
gttctccaacaagttgataagaaatttattcccattgtggccagcagaacacttgctttg
attgaccagcacgctgcagatgagaggattcgtcttgaagaactgcgacggaaggtccta
tctggggaactgaggagaacaaactatcttgatagtgagcaagaactgttcatgcctgaa
attggctttcaattgctacatgattatgctgaacaaattcaaaattggggttggatctgc
aatgttcatagtcagggttcaagatcttttacaagggatctgaatattatgcataagcag
caggctattgccacacttcttgcggtaccatgtattttaggtgttaatttgtccgatgtg
gatcttttagaatttcttcagcagcttgctgatacagatggatcgtcgacagtaccgcca
tcagtgcatagggttctgaacaacaaagcttgcaggggtgcaattatgtttggagacgct
ttattgccttcagagtgctccctcattgttgaagagctaaagcagacttcactatgtttt
caatgtgctcatggtcgaccaacaactgtcccacttgtcaatctcgatgccttaagcgag
cagatagcaaagattacatcatggagcagcagttcatgtgagtcatggcatggtttgcgt
cgtcatgaaattagtttacagcgaactgcacagcgattgagctctgctacacattaa
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