Ipomoea triloba (trilobed morning glory): 115998422
Help
Entry
115998422 CDS
T07384
Name
(RefSeq) WD repeat-containing protein RUP2-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04120
Ubiquitin mediated proteolysis
itr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115998422
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
115998422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
115998422
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115998422
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115998422
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115998422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_like
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
115998422
NCBI-ProteinID:
XP_031093859
LinkDB
All DBs
Position
12:26844118..26845773
Genome browser
AA seq
387 aa
AA seq
DB search
MNNFSSPTNAETSQTTQQEEDVDGERARCEWDFRISAVVSSPTSAAGAVSDALGVLEFDP
SDNFLATGGIARKIRVYSVNSLVPIRDQDEGYDAVSLDHSTACDYYICTPAKLSSLKWKP
GWNSRVLGSGDYDGVVMEYDLERRVPVFERDEHGGRRVWSVDYSHSDPVVGASGSDDGTM
QTWDPRCQNGKCLATVQPSKARSSVCCVQFSPFAPSIAAGCADRKTYTYDLRKTAEPLFI
LDGHLKPVTYARFLDHRTILTSSIDGCIKMWDTDHRNLVRTYKGHINSTRFVVFFFIGLS
VWKKGGLISCGSENNQVFVYDTRWGEPIWVYGCKSTGQPGPEHGFISCVCWMQRGDDHCT
LVAGGSDGVLRVFAGKRRKAAVTYNLA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttttcatcacctacaaacgcagaaacctcacaaactacacagcaagaagaa
gacgtcgacggagaaagagctcgctgcgagtgggattttcgcatctccgccgtagtttct
tctccgacctccgccgccggagctgtttccgacgctcttggggttctagagtttgacccg
tccgataatttcttggccaccggcggaatagcccggaaaattagggtttacagtgttaac
tcgctagttcctattagggatcaggacgaaggatacgacgccgtttcgcttgatcatagc
actgcatgcgattattacatctgcacgccggcgaagcttagtagtttaaaatggaagccc
gggtggaacagccgggttctcgggtcgggcgactacgacggggtagtaatggaatatgac
ctggagagaagagtgccggttttcgagcgtgacgagcacggcggcaggcgcgtttggagc
gtggactattcccattccgaccccgtcgtcggcgcgtcggggtccgacgacggcaccatg
cagacgtgggacccgcgctgccaaaacgggaagtgtctcgcgacggtgcagcccagcaag
gcgcgtagctccgtctgctgcgtgcagttcagccccttcgccccttccatcgccgccggc
tgcgccgaccggaaaacctacacctacgacctccgcaaaacggcggagccgctcttcata
ctcgacggtcatctcaagcccgtgacctacgccagattcctcgaccaccgtacgatccta
acctcaagcatcgacggctgcatcaaaatgtgggacaccgaccaccgcaacctcgtccgt
acatacaaaggccacataaactccacgagattcgtagtatttttctttataggtttatct
gtgtggaagaagggcgggttgatcagttgcgggtcggagaataaccaagtgttcgtgtac
gatacgaggtggggcgagcccatatgggtatacgggtgcaagtccacgggtcaacccggg
cccgaacatgggttcattagttgcgtgtgctggatgcagaggggagacgatcactgcacg
cttgtcgccggcggctccgacggagtgttgagagttttcgccggcaaacggcggaaggcg
gcggtcacttacaatctagcttag
DBGET
integrated database retrieval system
