Ipomoea triloba (trilobed morning glory): 115998570
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Entry
115998570 CDS
T07384
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115998570
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115998570
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
115998570
NCBI-ProteinID:
XP_031094026
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Position
12:complement(5842140..5844613)
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AA seq
474 aa
AA seq
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MRPNKKNIILTIFITSILCSLEPAMCSTEGRRQRHRKITRPLASYKEAYSHYKGELARSE
VRSHAEEGYNLQAESTATAPEQGVSSPTFNVLAYGAKGDGKADDTKAFEQAWQAACEQEG
STMLVPSGSVFLVKPISFSGPNCQPHIVFQLDGKIIAPTGSGSWGSGLLQWLEFTKLVGI
TIRGRGTIDGQGSVWWNSSPTDDNLVDQKLPKTKPTALRFYGSTDVTVTGITIQNSPQTH
LKFDSCTGVQVFNFSVSSPGDSPNTDGIHLQNSKDVAIHSTNLACGDDCISIQSGCTAVY
IHNVNCGPGHGISIGGLGKGDTKACVSNITVSDSILQNTMTGVRIKTWQGGSGMVQGIMF
SNIQVYGVETPIMIDQFYCDGGKCHNQTSAVAVADISYQSIKGTYTSKPVHFACSDSLPC
TGVTLATVELKPLPGKEVYDPFCWETYGELKTSTTPRIDCLRTTTQPKKIVDSC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctaataaaaagaacataatacttaccattttcattacctcaattctgtgctcg
ttagaacctgcaatgtgctctacggaagggaggcgccagaggcacagaaaaatcaccaga
cctcttgcttcgtacaaagaagcatacagccattacaaaggtgaacttgcgagaagcgaa
gtccgctcgcatgcagaagagggttacaatctacaagcagagtctactgcaacagcacca
gaacaaggtgtgagttctcccactttcaacgtattagcctatggtgctaaaggtgacggg
aaagcagacgacaccaaagcgttcgaacaagcatggcaagctgcttgtgaacaggaggga
tccacaatgctggtaccatcaggatctgtgttccttgtcaaacccatctcattctcggga
ccaaactgtcaaccgcacatagtcttccagctggatgggaaaatcattgctccaactggc
tctggatcatggggatcaggtctacttcaatggctcgagttcacaaagctcgtagggata
acaatacgaggtcggggaaccatagatgggcagggatcagtctggtggaatagctcccca
acagacgacaatctagtagaccaaaaacttccaaagaccaaaccaacagcacttcgattt
tatggaagcaccgatgttacagtaacagggatcactatccaaaacagcccacaaacacac
ctcaagtttgacagttgcacaggggtccaggttttcaatttcagtgtttcatccccaggt
gacagccccaacacagatggaattcacctacagaactccaaggatgttgccattcacagc
acaaatcttgcttgtggagatgactgtatttccatacaaagtggatgcacagctgtctac
atacataatgtgaactgtggacctggtcatggaattagcataggagggcttggcaagggt
gacactaaagcctgtgtttcaaacatcactgtcagtgactccatactgcaaaatacaatg
actggtgtaagaataaagacatggcagggtggatcaggcatggtccaaggtatcatgttc
tctaatattcaagtttatggagttgagacacctatcatgattgatcaattttattgtgat
ggaggcaaatgccataaccaaacatcagcagtagcagtagcagatatatcgtaccagtcc
ataaaaggaacatatacgtcaaaacccgtccattttgcttgtagtgactccttgccctgc
acaggtgtaacattggcaacggtagagctgaagccattaccaggaaaggaagtttatgat
ccattctgctgggaaacttatggagaactgaaaacaagcactacaccaagaatagattgt
ttaaggacaaccacgcaaccaaagaagattgttgattcttgttga
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