KEGG   Ipomoea triloba (trilobed morning glory): 115998888
Entry
115998888         CDS       T07384                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03013  Nucleocytoplasmic transport
itr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115998888
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115998888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:itr03019]
    115998888
   04131 Membrane trafficking [BR:itr04131]
    115998888
Messenger RNA biogenesis [BR:itr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115998888
Membrane trafficking [BR:itr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    115998888
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    115998888
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    115998888
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_RIG_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th EIF3I Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 WD40_2 SH3-RhoG_link Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 115998888
NCBI-ProteinID: XP_031094419
LinkDB
Position
12:complement(5488486..5489446)
AA seq 301 aa
MPAQKIETGHTDIVHDVSMDYYGKRVATASSDAMIKITRVSNNSTTQHLATLSGHRGPVW
QVAWAHPKFGSLLASCSYDGKVIIWKEGNQNEWTQYRVFSEHKSSVNSISWAPHELGLCL
ACGSSDGCISVYSARSDGSWDTKRIDQAHPVGVTAVSWAPPMVPGAIVGSGLLDPVRKLA
SGGCDNTVKVWKLCNGVWKMDSLPAIQKHSNWVRDVAWAPNLGLPKSTIASASEDGTVVI
WSVAKEGDQWEGKVLNDFKNPVWRVSWSLTGNMLAVASGDNNVTLWKEAVDGEWQQLKTD
H
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctgcacagaagattgaaacaggtcatactgacatagtacatgacgtatccatggat
tactatggaaaacgtgtggcaacagcttcgtctgatgcaatgatcaaaataactcgtgtg
agcaacaattctactacgcagcatcttgctactctaagtggtcatcgtggtccagtttgg
caggttgcttgggcacaccccaaatttggttcactccttgcttcctgttcctatgatggt
aaagtcataatctggaaggaaggcaaccaaaatgaatggacacaatatcgtgttttcagt
gagcataaatcatcggtcaattctatttcttgggctccccatgaacttgggctgtgcttg
gcctgtggatcttctgatggatgtatctctgtttatagtgccaggtcggatggtagttgg
gacaccaaaagaatcgatcaggcacaccctgttggagtaactgcagtgtcatgggctcct
ccaatggttcctggtgctatagttggctctggtttacttgatcctgttcgtaagcttgca
tctggtgggtgtgataacacagtgaaggtgtggaagctctgtaacggcgtttggaagatg
gattctctcccggccattcagaagcacagtaattgggtgagggatgtcgcgtgggcaccc
aacttggggcttccaaagtcgacaattgcaagtgcttccgaggacgggactgttgttata
tggagtgtggcaaaagaaggagatcagtgggaggggaaggttttgaatgacttcaagaat
cctgtttggagggtttcatggtctctgacaggaaacatgttggctgtagcctctggggac
aataatgtcacgctgtggaaagaagcagtggatggggagtggcaacaactcaaaactgac
cattag

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