Ipomoea triloba (trilobed morning glory): 115998911
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Entry
115998911 CDS
T07384
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115998911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
115998911
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
115998911
Prokaryotic type
Archaeal type
TFB
115998911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
115998911
NCBI-ProteinID:
XP_031094440
LinkDB
All DBs
Position
12:complement(2414036..2416987)
Genome browser
AA seq
509 aa
AA seq
DB search
MRCPYCAATQGRCAATSTGRSITECGSCGRVVEERHTHPHHIFHLRAHDSPLCLVTSDLP
TLPVSSAASANDGDDEDPFEPTGFITAFSTWSLEHYPLFAQSSLSFAGHLAELERVLETT
SSSSNPSSPSVVVDNLRAYLQIIDVASILGLEYDISDHAFQLFRDCSSATCLRNRSVEAL
ATAALVQAIREAQEPRTLQEISLAANLPQKEIGKYIKILGEALQLSQPINSNSISVHMPR
FCTLLQLNKSAQELATHIGEVVMNKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKV
TGLTEVTLRKVYKELLENWDDLLPSNYNPAVPPEKAFPTATIASGRTSNSRADIVEATSS
ERDKPGEAKMTKPMDGITISHLASQADTDRKDNIHASQNTMSWPPSLPKGPLGSSNERKT
AAEKNQNVAHAMEIDSQHKTPEDIKVETNTRVTSSSARPYFSSGAVPVSWPFQSPASSRF
PPSSQFLQPPKHNITDKGAIKQDENDKGN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgcccgtattgcgcggcgacacaggggcggtgcgccgccacatccaccggccgc
tcaatcacagagtgcggctcctgcggccgtgtggtggaggagcgtcacacacacccccac
cacatattccacctacgcgcccacgactctcctctctgcctcgtcacctccgacctcccc
accctccccgtatcctccgccgcctccgccaacgacggcgacgacgaggacccgttcgag
cccactggcttcatcaccgccttctccacttggtcactcgaacactacccgctgttcgcc
caatcctccctctctttcgccggccatctcgccgagctagagcgcgtgctcgaaaccacg
tcctcgtcttccaatccgtctagcccctccgtcgtggtggacaatcttagggcttatttg
cagattatcgacgtcgcttcaattctagggctcgaatacgatatttccgaccacgcgttt
cagctcttccgggactgctcttccgccacgtgcttgaggaatcgcagcgttgaagccctc
gccactgctgctcttgttcaagctatcagggaagctcaagagcctagaactctccaggaa
atatcacttgctgccaatttacctcaaaaggaaattgggaagtatatcaagatccttgga
gaagctctgcagttaagtcaaccgattaatagtaattctatatcagttcatatgccgaga
ttttgtacacttctccagctgaataaatctgctcaggagctggcaactcacattggtgag
gtggtgatgaataaatgcttctgcactcgcagaaacccgattagcatatctgctgcggca
atatacttggcttgccaactggaagacaaacggaagactcaggctgaaatctgtaaggta
acaggactcaccgaggtcactcttcggaaagtgtacaaggaactcttggaaaactgggat
gatctgctaccatcaaattataatccagctgtccctcccgagaaagctttcccgacagct
actattgcatcaggccgcacttcgaactcaagagctgacattgttgaagcaacttcttct
gagagggacaagccgggtgaagctaagatgaccaaaccaatggatgggataactatatcc
cacctggccagtcaggcagatactgaccgaaaagataatattcatgcctcacaaaacaca
atgtcttggccaccatcattgccaaaaggtccacttggtagtagtaatgagaggaagaca
gctgccgagaaaaatcaaaatgtggctcatgcaatggagattgattcacaacacaaaact
ccagaggatattaaagtagagacaaacacaagggtcacttccagtagcgcaagaccatac
ttctcttctggtgcagttccagtgtcttggccatttcagtcgccggcttcatcaaggttt
cccccctcgtctcaattcttgcagccaccaaagcataacattacagataaaggagcaatt
aagcaagacgaaaacgacaaaggcaattaa
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