Ipomoea triloba (trilobed morning glory): 115999023
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Entry
115999023 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115999023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
115999023
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115999023
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
115999023
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
115999023
NCBI-ProteinID:
XP_031094604
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All DBs
Position
12:complement(27402409..27405247)
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AA seq
331 aa
AA seq
DB search
MYKMEIESIECVSSSDGVVEEEEIPSSQRPHPHHHHHHQQYNSAAKPPQSNLLPAAIAPT
SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKAKVHNRCPTCRQELGDIRCLALEKVAE
SLELPCRYFSLGCPEIFPYYSKLKHETICNFRPYNCPYAGSECSVTGDIPYLVSHLRDDH
KVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFVRF
MGDETEARNYSYSLEVGGSGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGD
RKELKLRVTGRIWKEQQNPDSGVCIPNICSS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaatggagattgaaagcatcgagtgcgtatcttcgtcggacggcgtcgtggaa
gaggaagagatcccgtcgtctcagcgtccgcatccccaccaccaccaccaccaccaacag
tacaactccgccgctaagccgccgcagagtaatttgttgccggccgcaattgcccctact
agtgtccatgaattgctggaatgccccgtttgcaccaattctatgtaccctcccattcat
cagtgccacaatgggcacacgctctgttcaacctgtaaagcgaaggtgcacaaccgatgt
ccgacttgcagacaagagcttggcgatattcggtgtttggcgttagaaaaggtagcagag
tcgcttgaacttccctgcagatatttttcattggggtgtccagaaatattcccatattac
agcaagcttaaacatgagacaatttgcaattttagaccatacaattgtccatacgctgga
tcagagtgttcagttaccggtgatataccttacctggtttctcatttgagagatgaccac
aaagttgacatgcacacaggatgcacattcaaccatcgatatgtcaagtctaatccgcgg
gaagtagaaaatgccacatggatgctgactgtcttccactgttttggccagtacttctgt
cttcactttgaggccttccagcttggcatggcacctgtttacatggcttttgtccgcttc
atgggcgacgagactgaagcccgcaattacagctacagtctcgaagtaggaggaagcggt
agaaagctaatatgggaaggtactccaagaagtatccgagacagccaccgcaaggtgagg
gacagtcacgatggccttatcattcaacgtaacatggcactgttcttctccggtggggat
aggaaggaactgaagcttagggtcaccgggaggatatggaaggagcagcaaaacccagat
tctggggtgtgtataccgaatatttgtagcagttaa
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