Ipomoea triloba (trilobed morning glory): 115999044
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Entry
115999044 CDS
T07384
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
115999044
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115999044
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Helicases
115999044
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
115999044
NCBI-ProteinID:
XP_031094639
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All DBs
Position
12:complement(16968056..16977520)
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AA seq
796 aa
AA seq
DB search
MASQPSDSKKKKQKKPKKRVREDSELLEHLDSLPWNFSLPETDDAFSHLFGDDELGGGFL
SLEEVDETTYGLEISKSSGGNEQPKSKGKPKTKKQKISESHDDSIGEEGDDKADEEIKQM
KKKRSKKKKGSLVNKTEENTELTAVSNNKNDDEEDSVDETEFYAWNEMRLHPLLMKSIYR
QNFKEPTPIQRACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEKEKADRLNAED
GEVDEKIAPRGLLRALIVTPTRELALQVTDHIREVAKHTNIRVIAIVGGMSTEKQERLLK
RRPEIVVGTPGRLWELMSGGEVHLIELHSLSFFVLDEADRMIETGHFQELQSIVDVLPMA
SRSTDGHSMETQNCITVSSVQRKKRQTFVFSATISLSADFRKKLKRGSQISKSNDELNSI
ETLSERAGMRADAAIVDLTNASIMANKLMESFIECREEDKDGYLYYILSVHGKGRTIVFC
TSVAALRHLSSMLRILGINVSTLHAQMQQRARLKGIDRFRSNENGILIATDVAARGLDIP
GVRTVVHYQLPHSAEVYVHRSGRTARAFSDGCSIALISPNDASKFASLCKSFAKESFQRF
PVEISYMPEVMKRLSLARQIDKILRKDSQDKANKTWLERHAESVELELDDDDSEEERVKS
FKQKKATSSQLKNLQQDLKSLLSLPLQPKTFSNRFLAGAGVSPLLQNQLEELAKLKLGKI
SNTGDSQRRKLVVIGQDCVEPLQALRSAGPEAHLDLKEIAEKRKNMDNIRRKRKEAKKRQ
REQRRKQRKKSQGAND
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaaccttcggatagcaagaaaaagaagcagaaaaaacctaaaaagcgtgtc
cgagaagactctgaactacttgagcatctcgactcacttccatggaacttttcgctccct
gaaaccgatgacgcgttctcccatctcttcggtgatgatgaactcggaggaggattttta
tcactggaggaggttgatgaaacaacatacggattggagatttcaaagtcgagtggagga
aatgagcagccaaaatccaagggaaagccaaaaacaaaaaagcagaaaataagtgaaagt
catgatgattccattggtgaagagggagatgataaagctgatgaggaaataaaacaaatg
aaaaagaaaagaagtaagaagaagaagggtagcctggtgaataaaacagaagaaaataca
gaattaacagctgtttccaacaacaaaaatgatgatgaagaggattcagtagatgagact
gaattttatgcatggaatgaaatgagacttcatcccttgcttatgaaatcaatatacaga
cagaatttcaaggaacccacaccaatacagagagcttgtattcctgcagctgctcatcaa
ggaaaggatgttgtaggtgctgcagagactggatctggaaaaacacttgcatttggttta
cccattcttcagcgccttcttgaagagaaagaaaaagctgacagacttaatgcagaagat
ggggaggtagatgaaaaaatagctcctagaggtcttcttcgggctctaattgttactcct
acaagagagcttgcacttcaggtcactgatcacatcagggaagtagcaaaacacaccaat
attagggttattgctattgttggtggcatgtctactgaaaagcaagagagactattgaaa
cgaaggcctgaaattgtggtcgggactcctgggaggctctgggaacttatgtcaggtgga
gaagttcatcttatagagctacattcattatcattctttgtgctggatgaggctgatcgc
atgatagaaactgggcattttcaagagttgcagtccatagttgacgtgctccccatggct
agtagatcaactgatgggcattctatggaaacacagaattgcataacagtttcaagtgtc
caaagaaagaaaaggcagacttttgtcttttctgcaactatttccctatctgctgatttt
cggaagaagttgaagcgtggatcacaaatatcaaagtctaatgatgagttgaattcaatt
gaaactctttcagagagagcaggaatgcgagcagatgctgctattgttgacctaacaaat
gcatcaataatggcaaacaagcttatggagtcattcattgagtgcagggaagaagataaa
gatggatatttatattatatcttgagtgttcatgggaaagggcgcacaattgttttctgt
acatccgttgcagcattacgccatctttcctcaatgttgcgcatccttggcatcaatgtt
tcgacacttcatgcccagatgcaacagcgagcacgactaaagggaattgatcgttttcgc
tcgaatgaaaatggcatacttattgctactgacgttgcagccagaggccttgatattccc
ggtgttcgaactgttgttcattaccagcttccacattcagctgaggtttacgttcataga
agtggaagaactgctagagctttctctgatgggtgtagtattgccctaatctctccaaat
gatgcatcaaagtttgcttctctatgcaaatcctttgctaaggaaagcttccagcgattt
cctgtagagatatcatacatgccggaggttatgaaacgattatcccttgcacgccaaata
gacaaaattcttaggaaagactctcaggataaggccaataaaacttggcttgaacgacat
gctgaatcagttgagttggaattggatgatgatgatagtgaggaggaaagggtaaaaagt
tttaaacaaaagaaagccacttcttctcaattaaagaacctgcagcaggatctgaagtct
cttctttctctcccattacaacccaagacattttcaaatcgctttttggcaggggctggg
gtttctcctctactgcagaaccaattagaggaactagctaagctgaaacttggcaaaata
agtaatactggagacagtcaaaggaggaaattggtggttattgggcaggattgtgtggaa
cctctccaggcacttcgaagtgctggtccagaggcacatctggatttgaaggagattgca
gaaaagcggaaaaacatggacaacataaggagaaagagaaaagaagcgaaaaaacgtcag
cgtgagcaacgccgaaagcagaggaaaaagtctcaaggtgcaaatgactga
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