Ipomoea triloba (trilobed morning glory): 115999705
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Entry
115999705 CDS
T07384
Name
(RefSeq) Fanconi anemia group D2 protein homolog isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115999705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
115999705
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
115999705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
EcoRII-N
Motif
Other DBs
NCBI-GeneID:
115999705
NCBI-ProteinID:
XP_031095452
LinkDB
All DBs
Position
12:7170184..7183217
Genome browser
AA seq
1545 aa
AA seq
DB search
MIPSPPRFSKLNKIWRLLSILSSQFPAQKIRRKTKKLKNPFPNSPSFPQMVLRESNQLSS
RKRPSKPNNAFVPPFAHPPKIPKTTAAAAVSQSAPPHQSQSTNPVDKMVAVLADAGCTLI
NPAGPPCLPSDLPKLRHRLHHLFSSDSSLRSEFLHGLCSYINSPNNLRRILSHSNRDGLV
SVRSESVVRVLLLVPSIQSDIQNMLLEKLPEYFDMDPSGPLPSSRFEDDIARLILNQFRW
LDFLVDSEAFIDRLLQVLSICPLHLKREMIGSLPEIIGDQNNKVVVDSLQHMLEEDPSVI
IPVLDCFSNLHLDETLKEQVVTIGLSCIRTADMEHMPYLLRFLLLSATISNTRRIISHIR
EQLKLIGGFSYHATQQGKMKGKSIVNDGEASVLDALRSSLQFNKQIICEEVLKELKSLEK
ARDHKTIDIWLLVLIYKNSESLQKSIEKLLKKKIVEGYIDEALFDQCVHGNKAIAQDYLP
TFISISGYLLACKEQKAQEFGIHMYKCLFEEFVDSFSRQELLGALITHVGSGISHEVRSG
LQAMALLASKYSHELIPLSSHIMGILDYLEGFSFENLHKVYEAFSLLALSARSNAGSRSS
ISNELLMIVRKQLSNPDLKYKKMGLIGTVKIVYYFGAEVINSSQSSSQKSNVEEALELLK
TSLESCKQIPLPLIMFYDELVVTLKNRSLHPSITEWISKHIGDFESKYLSDLDGGQLPIK
DVYCGLEGQLWMNLDGDISPICVNLLPLVSSSLRSAPSLEILPAKISLLSTIEKLTNQGS
LLGIDALLGCPLHLPSSKLFSVPAWQSLNGNQKQIIILSLYYAANWIRELLNAFCSQVTN
KCDHVSQGTKEEIALKLFKRLRNLIFLESMLNNCLRQYPLSLPELCPLEPPSKNLVNQTR
EHERSNELTKRDISSSESTRKKKNKNPALSASSKEDGKLRQPTITDVLRKAGVIPSPEVL
NEDLSGTCSKGSIPESSGSHQNNLISPLNVEISSAAKLLEPQRHKFRPLLLECFPIFALS
KNQVSCCPDPAAELPLHLYLLRDLSQKLDYCSPQQKQILAKRASLPPSLGCMNVMDFLNH
VRLLFPSLKKNLDHVLYILREDTEICQDHWNVQSAAAGNPDITGILCSTSKVSYSVLKET
LCCFAKMVNIPEIQMETAVLTDLLEAFQPTKIPDSFFLGMHHIPSPGNIDYLYSGAYYYL
EELFSVASTISFTLSSEVVLTLEAVILSIRKIVDKDSDETGNIIQKGFIKELFPFLCEKL
GTSAKTLLTQKYDSENVEEDSKIRRELVQKILRIYLENCQSTSDSLNELACSILPQVTPK
GSEVEDKCSFPSLCPSTFIAWYRVMHEQNVATLNRLVKEVCQLEKSKARDNVENVDCLLN
RLQQSVNVVVSLVSMCKTHDKVAVRAMAVKFGGKFVDSFLRVFGFLQAQFQSHGEQIVQL
VLELQKATRTIQTLCSEAKGLKQTTITSKIPSTKRSMERFLFHVKALLHSTSSGCTFWMG
NLKHKNLVGDIVSSQAYKEEEEEDVDHNEAENTEEDQPVDVANEE
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgatcccctctcctccgcgattttcaaaacttaacaaaatttggcgcctcctctccatt
ctctcttcccagttcccagcccagaagattagaagaaaaacgaagaagctgaaaaaccct
ttccccaattccccctcgtttccacaaatggttctccgtgaaagcaatcagctctcgtcc
cgtaaacgcccctccaaacccaacaatgccttcgttcctcccttcgctcatccccccaaa
atccccaaaaccaccgcagccgccgccgtttcgcagtcagcgccgccgcaccaatctcaa
agcactaatcctgtcgataaaatggttgcagttttagctgatgccggttgcacgctgatc
aaccctgccggtcctccgtgcctcccgtccgacctccccaagctccgccaccgcctccac
catctcttctcatccgactcctcgttgcgttctgagttccttcatggcctctgttcttat
atcaactcccccaacaaccttcgccgcattctatcacattcaaatcgtgatggtttggtt
tcggtgagaagtgaaagcgtggttagagtactgttacttgttccttctattcagtcagac
attcaaaacatgttgcttgagaagcttccagaatactttgatatggaccctagtgggcca
ttgccctcttcccgatttgaggatgatattgccaggctaatactgaaccagtttcggtgg
cttgacttccttgtggattctgaggcatttattgatcggttgttacaagtattgtcaatt
tgcccccttcacttgaagagggaaatgattggatctttgcctgagattattggggatcag
aacaacaaagttgtggtagattcactccagcacatgcttgaagaggatccctctgttatt
attcctgtgctcgattgtttctctaatctccatttggacgagactttgaaagaacaggtt
gttacaataggattatcttgcattcgaacagctgatatggagcatatgccatacctactc
agattcttattgctctctgccacaatatcaaatacccgtcggataatatcacatatccgc
gaacagttaaaattaattggaggatttagttatcatgcaacacagcagggtaaaatgaaa
gggaagtcaattgtaaacgatggggaggcttcagttcttgatgccttgaggtcaagtctt
caatttaataaacagataatttgcgaggaagtactaaaagaactgaaaagccttgagaaa
gctcgggatcataagactattgatatatggctacttgtactaatatacaagaatagtgag
tccttgcaaaagagcattgagaagttactgaagaagaaaattgtcgaaggttatattgat
gaagcattatttgatcaatgtgtacatgggaataaggctattgcacaggattatcttccc
acatttatctctatttctgggtacttattggcatgcaaagaacaaaaggcacaggagttt
ggcattcatatgtataaatgcttatttgaagagtttgttgatagcttttcaagacaggaa
cttttaggagcattaatcactcatgtgggctctgggattagtcatgaagtgagatctggt
ttgcaagccatggcactccttgcctccaaatactcccatgagttgattcctctttcgtct
cacataatgggtatcttggattatttggaaggatttagttttgaaaacttgcacaaggtg
tatgaagctttcagccttcttgctctttcagcaagatctaatgcagggtccagatcttct
atttctaatgaacttctgatgattgttaggaagcagttgagtaatcctgatcttaagtat
aaaaagatgggcctaattgggacagttaagatagtttattactttggagctgaagtgatt
aactcctcccagtcttcatctcagaagtcaaatgttgaggaggctttggagcttttgaaa
acatctttggaatcttgcaaacaaattccattgccactaattatgttttatgatgaattg
gtcgtgacattgaaaaaccggagtcttcatccatccatcacagaatggatcagtaaacat
ataggagactttgaatcaaaatatttgtcagatcttgatggtgggcagctgccaattaaa
gatgtatattgtggtttggaaggacaattgtggatgaacctcgatggagatatatctcct
atatgtgtgaacttattgccacttgtttcctcttcattgcggtctgctccatcattggaa
atactacctgcaaaaatcagtttgctttctacaattgagaaattgacaaatcaaggatca
ctcttaggcattgatgcacttcttggctgccctttacacctcccttcctcaaagctcttt
tctgtacctgcttggcaatctttgaacgggaaccaaaagcaaattattattctttcattg
tattatgctgctaactggatccgtgaactgctcaatgccttctgctctcaagttaccaac
aaatgtgaccatgtaagccaaggaacgaaggaggagatagctcttaaactattcaagcgg
ttgaggaacctcatattcttggagagcatgctaaataattgtctcagacaatacccttta
tctctgccggaactctgccctctggagcctccatcaaaaaacctggttaatcaaactagg
gaacatgagagaagcaatgagcttactaaacgagatataagttcatcagagagtactaga
aagaaaaagaataagaacccagcactatcagcaagctcaaaagaggatggaaagctgagg
cagccaactatcacagatgttctgagaaaagcaggtgttataccaagcccagaagtgcta
aatgaggatttatctggaacgtgttcaaagggaagcataccagagtcatcagggagtcat
caaaataacctcatttccccgcttaatgtggaaatttcttctgctgcaaagcttctagaa
cctcagagacacaaattcagacctcttctgctggagtgttttcccatatttgcattatca
aagaatcaagtctcttgctgcccagatccagctgctgagctaccgcttcatctttatctc
ctacgtgatcttagccaaaagctggattactgtagtccacaacagaaacaaatactggcc
aaacgtgcaagtctgccacccagtcttggttgtatgaatgtaatggacttcttaaatcat
gttcgcttgctgtttccttctcttaaaaaaaatcttgatcatgtgctttacattcttaga
gaagatactgaaatatgtcaagatcattggaatgttcaatctgctgcagctgggaaccca
gatataacaggcattctttgttccacatcaaaagtttcttactctgtcttaaaggagaca
ctctgctgttttgcaaagatggttaacattccggagattcagatggaaacagcagtccta
accgatcttctagaggctttccagccaaccaaaattccagattccttctttctaggcatg
caccatattccttctcctgggaacatagattatttatattcgggtgcatattattacctt
gaagaattatttagtgtagcaagtacaatttcttttacactatcttcagaggtagtgctg
actttagaagcagttatattgtcaatccgaaagattgtagataaagattcagatgaaact
ggaaatattattcagaaaggatttatcaaggagctatttccctttttatgtgaaaagctt
ggaacttctgctaaaacactattgacacaaaagtatgatagtgaaaatgtcgaagaggat
tcgaaaatcagacgtgaactggtccaaaagattcttcgcatttacttggaaaattgccag
tccacctctgattctttgaatgagcttgcttgctctatattgccccaggtgactccaaag
ggaagtgaagtagaagataaatgtagctttccaagtctctgtccttcaacgttcattgct
tggtatcgggtgatgcatgaacagaatgttgcaacgcttaatagattagttaaggaagtt
tgtcagttggagaaatccaaagcacgtgacaatgtggaaaatgtggattgcctacttaac
agactgcaacaatctgttaacgttgtggtatctttagttagcatgtgcaaaactcatgat
aaggttgctgttcgtgcaatggctgtcaagttcggcgggaagtttgttgattctttcctc
agagtttttgggtttttgcaggctcaatttcaatcgcatggagagcaaatagtccaactg
gttctagaacttcagaaggcaacaagaaccatacagacactatgttctgaagcaaagggc
ttgaagcaaactactataaccagcaaaattccatctacaaagagatctatggagcgcttc
ctctttcatgtcaaggctctccttcattctacatcaagcggatgcactttttggatggga
aatttaaagcataaaaacttggtgggagatatagtgagctcccaagcgtacaaagaggag
gaggaggaggatgtggatcacaacgaagctgaaaatacagaggaggatcaaccagtggat
gttgctaatgaagaatga
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integrated database retrieval system
