Ipomoea triloba (trilobed morning glory): 115999712
Help
Entry
115999712 CDS
T07384
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04120
Ubiquitin mediated proteolysis
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115999712
04120 Ubiquitin mediated proteolysis
115999712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
115999712
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115999712
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115999712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-RING_11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115999712
NCBI-ProteinID:
XP_031095460
LinkDB
All DBs
Position
12:complement(27772495..27777354)
Genome browser
AA seq
529 aa
AA seq
DB search
MLRLQTYAGLSLIATLAVIYHAFNSRGQFYPATVYLSTSKICLVVLLNMGLVIMCILWQL
TKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTTLLLIKALHWLA
QKRVEYIETTPTVPLLSHIRIVSFMGFLLFIDSLFLYNSVNYLIQTRQASVSLFFSFEYM
ILATATVSTFVKYIFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFINYG
VPLHLIRELYETFRNFKIRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRAQVVPPENGASQTGPTGPRADSQQGTSVAS
SSQGSQADGERNSNINQHQARIQAAASAASIYGKSFVYTYTPSHAQLWSPGFAMRPPPNK
PSDGSASVSSGGEHALGEHSQPLQFANASFAQFPQYAFVPFQLPGHADIGSSSGPLTGDM
HPEVQKKVIEEQIKALQHQLTLLPKPNTENKTAAAETCDGKGKAVSSSS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggctgcaaacatatgcagggctgagtctaatagctacactggctgtcatttac
catgctttcaatagtagaggccaattttacccagcaacggtttacttatcaacctcgaag
atctgtctggtggttctccttaacatgggtctggtcattatgtgcattttgtggcaatta
acaaagaaaatattccttggttcccttcgggaggcggaggtcgagaggctcaatgagcag
tcatggcgggaagtcatggaaatacttttcgccatcacaatcttccgacaagacttttca
gttacatttcttgctatggttactacacttctgcttatcaaggctttgcattggttggct
cagaagagagttgagtacattgaaacaaccccaacagttcctttgttgtcccacatccgc
attgtctccttcatggggtttctcctctttatagatagtctctttttgtacaactccgta
aactacttgatacagacaagacaggcttcggtttctctcttcttttcatttgagtacatg
atccttgcaacagctactgtgtcaacatttgtgaaatatatattctatgttagtgacatg
cttatggaaggacagtgggagagaaaggctgtctacacattctacttagaacttatccga
gacttacttcatttgtctatgtacctttgcttcttccttgtcatttttatcaactatggt
gtacctctgcatttgattcgggagctttatgagacatttcgcaacttcaaaattcgtatt
gctgattacatacgctatcggaagatcacttcaaacatgaatgatcgttttccagatgct
acaccagaagaactcaatgcaagtgatgctacctgcatcatttgccgtgaggagatgact
accgcaaagaaactcatttgtgggcatcttttccatgtgcattgcctccgttcatggttg
gaaaggcagcacacctgtcctacctgcagagcccaagttgtgcctcctgaaaatggggca
agtcaaacagggccaacaggaccacgagctgattctcagcaaggaacaagtgttgcaagt
tcatcccagggttcacaagctgatggtgagcgaaatagcaatattaaccagcatcaagct
aggatacaagctgctgcttctgctgcttcaatatatgggaaatcttttgtttatacttac
actccctcacatgcacaattgtggtcccctggattcgccatgcgtcctccccccaataaa
ccttcagatggctctgctagtgtaagctcaggcggtgagcatgctctgggtgaacattca
cagccacttcagttcgcaaacgcaagctttgctcagtttccacagtatgcttttgttccc
ttccaacttcctgggcatgctgacattggatctagcagtgggccccttactggagatatg
catcccgaggttcagaagaaagtcatagaagaacaaattaaggctctgcaacaccagctc
actcttctacctaagccaaatactgagaacaagactgctgctgcagaaacttgcgatggc
aagggaaaagccgtgtcctcatcatcttag
DBGET
integrated database retrieval system
