Ipomoea triloba (trilobed morning glory): 115999715
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Entry
115999715 CDS
T07384
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115999715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
115999715
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115999715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
115999715
NCBI-ProteinID:
XP_031095464
LinkDB
All DBs
Position
12:2332366..2340804
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AA seq
1064 aa
AA seq
DB search
MASDSMDSMTMRISELLKEVQLDYSPVNTKIINDVVSSIKEAIDKIPENKVTADLAPGFI
RDINADKVEFTFKKPLSIEIGGSYAMQCVVKPDINVDLLLCLPKECFHEKDYLNHRYHAK
RFLYLCKIKKHLDGLPQFDSLRWSAFQNEARKPILVVSPAAKLVEKTGFIVRIIPTATSL
FNPSKLRLERNNIRSLNQGDVIQATPKYNSSILEDLFIEYNAEFIKSTFSEWKELKEALI
LLKVWARQRSSIYVHDCLNGFLVSLIIAFLAKRTGSNSIKNIMTAMQIFRVTLEFIANSK
IWDQGLLFKVEGENSDSIKDRRIFFQQFPVVICNSSIELNLAFRLSQSGFQELRNEARLA
LICIKNCRDGGFDELFMTKIDFPAKYDYCIRLNLQGHHDFRKLGFCLDDECWRSYENKVL
SVLNQGLTDRSKLVRVIWKNTVYGGNFEEGMLLWDGEPLLIGISVSSAEAAFKKAIMGPS
HEEKDKALEFRKFWGDKATLRQFRDNRIAEVAVWECKEWEKHLIMKDIVEYVLSRHLSIT
KENIIPIAGQLDFTLLQKDLDPISFSTTLLGAFEELSKRLRQLNDIPLKVSSVQALDPAF
RLTSVFPPAPHPLAYEKGIDTKLQKPISTCLRPLEVAIQLEGSGNWPMDEVAIEKTKSAF
LLNIGESLQNNWGMTCTATEDDVEVLMSGFAFRLKILHERALSLVNGQINSGPSKLVLTA
DKELLLHNIHAGKINGLRGRYPIYGPVVRLAKRWVSAHLFSTLLAEEAIELLVAHLFLSP
LPFDPPYSRITGFLRFLRLLSEYDWMFSPLVIDFHGVSTNEEKQEGSDFTTEDMKKINVA
FKKSREESQTKMHDVSPAMFLATKYDLASETWTRSTPAMTELKRLVAYATSSANLLTKLI
SQDECDSSVWKCLFRTPLNNYDAVVLLHRDKLPYPHHLLFPSELEQGRCVLHGKPTKIFH
PFIVPADLRGRSEELKSKLMVNFDPLRCFISEIEREFPDTFKIWYDSLGGDAIGLTWGKA
SSKKRGRDSMAEGEDPLDLLKSVGEVGKGFVRSIHFLKARKLSQ
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgattctatggattcaatgacaatgaggatttccgagctgttgaaggaggtc
cagctcgattattctccggtaaacaccaaaattatcaacgacgtcgtttcctccatcaaa
gaggccatcgacaaaatccccgagaacaaggttactgctgatttagcaccggggttcatt
agagacattaatgctgataaagttgagtttacgtttaagaagccattgtcgatagaaatt
ggaggtagttatgcaatgcaatgcgttgtcaaaccagacataaatgtggatcttttgctt
tgcttgccgaaggagtgctttcatgagaaagactacttgaaccaccggtaccatgctaaa
agatttctttatctttgcaaaatcaagaagcatctggatggtttgccacaatttgatagt
ctgaggtggtctgcttttcaaaatgaggctcggaaacctatactggttgtctcgccagct
gcaaagctggttgaaaagactggattcattgtaaggataattcccacagcaacatcattg
tttaatccatcaaagctgcggttggagcggaacaatattcgttctctgaatcaaggagat
gttatacaggctacaccaaaatacaacagtagtatattggaagatttgttcatagagtat
aatgctgaattcattaagagcaccttttctgaatggaaggaattgaaagaagctctgata
ctgcttaaagtttgggctcgccagaggagttcaatatatgtccatgattgtttaaatgga
tttctagtttctcttataattgccttccttgcaaaaagaactggtagcaacagtataaag
aacataatgactgcaatgcaaatatttcgtgtcacactggaatttattgcaaattctaaa
atttgggatcagggactcttatttaaggtagaaggtgaaaacagtgattcaattaaggac
agaagaatattcttccaacaatttcctgtggttatttgcaattcatctatagaactcaat
ctggcattccgcttgtcacagagtggtttccaagagcttcggaatgaggctcgattggca
cttatttgcattaaaaattgtagagatggtggatttgatgagctttttatgacaaagatt
gattttcctgccaaatatgactactgcataagattgaatctgcagggacaccatgacttt
cgtaaattgggattttgtttggacgatgaatgttggagatcttatgagaacaaggttctt
tctgtcttgaatcaagggttgacagacagatctaagcttgttcgtgttatttggaaaaat
actgtgtatggaggcaattttgaggaggggatgttattatgggatggagaaccattgctt
attgggatttcagtcagttctgctgaggcagcctttaagaaggctatcatgggccctagt
catgaggaaaaagataaggctctagagtttcgtaagttctggggagataaggcaacacta
cggcagtttcgtgataatagaattgctgaagttgcagtatgggagtgtaaagagtgggaa
aagcatctcattatgaaagatatagttgagtatgttttatcacgccatttatctattacc
aaagagaatatcattcccattgctggccaacttgatttcactcttctccagaaggattta
gatcctatatctttctcaactactcttttgggagcatttgaagagctatcaaagcgtttg
cgtcaactaaatgatattcctttgaaggtgtcaagcgttcaagctcttgacccagctttc
aggctgacttcagtcttcccccctgcaccccatcctctggcatatgaaaagggcattgac
acaaaactacagaagcctatttctacctgtctacggccacttgaagttgcaatccagctg
gaaggctcaggaaattggccaatggatgaagttgctatagagaagacaaaatctgcattt
cttctcaatattggagaaagtcttcagaacaattgggggatgacatgtacagcaacggag
gatgatgtggaggttctaatgtctggatttgcattccgccttaaaattttgcatgagaga
gctctgagtttggtaaatgggcaaattaattctggtccgtcgaagttggtgctcactgca
gataaagagctcctcctacataacattcatgcaggcaagatcaatggcttacgaggtcgt
tatccaatttatgggccagttgttcgtctggcaaaacgctgggtatctgcacatctcttt
tccaccttgttggcagaggaggccattgagttgttggtagctcatttgtttctgagtcct
ttgccatttgatcctccttactctcggataactggattccttaggttcttgagattattg
tcagaatatgactggatgttttctcctctggtcattgattttcatggtgtttctaccaat
gaggaaaagcaagaaggaagtgattttacaaccgaggatatgaagaaaatcaatgtggct
tttaaaaaaagcagagaagaatcacaaacaaagatgcatgatgtaagtccagcaatgttt
ttggctactaaatatgacctcgcctctgaaacttggaccagatcaacaccagcaatgaca
gagcttaagagattagtggcatatgcaactagcagtgcaaatttgttaaccaaactgatt
tcccaagatgaatgtgattcttctgtctggaagtgccttttccgcacacctttaaacaat
tatgacgccgttgttcttcttcacagagacaaattaccctatccacaccatcttcttttc
ccatctgaactcgaacaaggacggtgtgtgttgcatggcaaaccaaccaagattttccat
cctttcattgttcccgcagacctcagagggaggtctgaggaattgaaatctaagctgatg
gtgaactttgatccactgaggtgctttattagtgaaattgagagagaatttccagacacg
ttcaagatctggtatgactcgttgggtggtgatgccatcggtctcacttggggaaaagct
agttcaaagaaacgaggaagggattccatggctgagggcgaagatccacttgatctactg
aaatctgttggtgaagttggtaaaggctttgtgagaagtattcatttccttaaagcccga
aaattaagccaatga
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