Ipomoea triloba (trilobed morning glory): 115999959
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Entry
115999959 CDS
T07384
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
115999959
04121 Ubiquitin system [BR:
itr04121
]
115999959
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115999959
Membrane trafficking [BR:
itr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115999959
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115999959
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
VPS18_RING_C
Zn_ribbon_GTF2H2
Zn_ribbon_RPAB4
zf-C3H2C3
HypA
Zf_IFT144_1st
DUF7129
Motif
Other DBs
NCBI-GeneID:
115999959
NCBI-ProteinID:
XP_031095794
LinkDB
All DBs
Position
12:complement(24914953..24916770)
Genome browser
AA seq
379 aa
AA seq
DB search
MSTSSTYWCYSCNRFVRVASQDSISCPDCDSGFIEEVDSPPPRSSSLSESRRRRFPAAAM
YMTPQNSEQNAAGSAGPGSSPALRRSRRNGGDRSPFNPVIVLRGPSDGGSSGGAAAAGVG
FQLYYDDGAGSGLRPLPATMSEFLLGSGFDRLLDQLAQIEANGLGRIENPPASKAAIESM
PTIEIEDSHVDTESHCAVCKDPFELGNEAREMPCKHLYHSDCILPWLSLRNSCPVCRFEL
PTDTRDSGEPNTTSPTSSNDQTLNDDETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVV
YTEMDGGFNSNGLPRRISWGSRVSVSRPSSRLRRAFRNLFACFGGGVASSASSTSSDSRV
THSSVLPSAIRADSRRRRV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcttccacgtattggtgttacagttgcaataggttcgtgagagtggcgagc
caggattcaatttcgtgccccgattgcgacagcggatttatcgaggaggttgattcgccg
ccgccgcgatcctcctcgctctcggaatcccgccggcgacggttccccgcggcggcgatg
tacatgacgccgcagaattcggagcaaaatgccgccgggtctgcgggtcccgggtcgagt
cccgcgctccggaggagccggaggaatgggggcgaccggtctccgtttaacccggttatc
gtcctccgtggcccgtccgacggcggcagtagcggtggcgccgccgccgccggagtcggg
ttccagctttattacgacgatggagccgggtcgggtttacggcctttaccggctaccatg
tcggagtttctactcgggtcgggcttcgaccggcttttggatcagttagcccagattgag
gctaacggccttggaagaatcgagaacccacccgcgtcaaaagcggcgatagaatcaatg
ccgacaatcgagatcgaagattcccacgtagatacggaatctcattgcgcggtttgtaaa
gatcccttcgagctcggaaacgaggctcgcgaaatgccctgcaaacacttataccattcc
gattgcattctcccatggctatcactccgcaattcctgccccgtctgtcgattcgagctc
ccaacagacacccgagactccggcgagcccaacacgacatccccgacatcatcaaacgac
caaaccctaaacgacgacgaaaccgtcgggctcacaatctggagattgccgggcggcgga
ttcgccgtgggacggttttccggcgggagaaggggcggggagagagagctccccgtcgtg
tacactgaaatggacggcggatttaacagcaatggattgccgcgccggatttcttggggg
tctagggttagtgtttcccggccgagcagtcgtctgagaagagctttccgcaatttgttt
gcgtgtttcggcggcggcgttgcctcttcagcctcctccaccagctctgattctagggtt
actcacagtagtgtattgccctctgcaatccgggctgattccagaaggcgcagagtttga
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integrated database retrieval system
