KEGG   Ipomoea triloba (trilobed morning glory): 115999965
Entry
115999965         CDS       T07384                                 
Name
(RefSeq) splicing factor U2af large subunit A-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115999965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    115999965
Spliceosome [BR:itr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115999965
 Complex B
    115999965
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 115999965
NCBI-ProteinID: XP_031095808
LinkDB
Position
12:22874189..22880541
AA seq 588 aa
MDPESDAAQLVATQLSGENDVAGFDDGENGSRKRRTSSKHSSREYDQEKESSRSRDKERE
RGRDKDRDRDREKEKDRDKDRDRHHRDRSERKRTRDKDDDAEVGNDHGYRSRDYDRHRDR
DESHRHRSKSYDRDREERRRHRSKSHDKDREERHSHRSHSRGRSGHKSKSRSPSPTQSRS
RSRSKSKRVSGFDMAPSPSALLPGAPGLAGQIPGTAPTIPGIFPNMLTLAPGQLGALPVM
PVQAMTQQATRHARRVYVGGLPPSANEQSVAIFFNHVMSAIGGNTAGPGDAVVNVYINHE
KKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSLAATLGPSQPCPNLNLAAV
GLAPGSSGGLEGPDRVFVGGLPYYFTENQIRELLESFGPLRGFNLVKDRETGNSKGYAFC
VYQDVSVTDIACAALNGIKMGDKTLTVRRASQGSLQPKPEQESVLLHAQQQIAFQRLMFQ
PGGLPTKVLCLSNVVNEDELRGDEDYEDILEDMRTECGKFGTLVNLVIPRPRPDGEPTPG
VGKVFLEYADIEGSTTAQQKLNGRKFGGNEVVAVFYPENKFSQGEYEG
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggaccctgaaagtgatgcggcccagcttgtagctacccagctgagtggtgagaatgac
gtagctggctttgatgatggggaaaatggctccaggaaaagaaggactagttcaaagcat
agttctcgtgaatatgatcaagaaaaggagtcttcaagaagcagggataaggaaagagag
agagggcgtgataaggatagagatagggacagagaaaaggaaaaggacagagataaggac
cgtgatcgtcaccatagagatcgaagtgagagaaagagaactcgagataaagatgatgat
gctgaagttggtaatgatcatggctataggagtcgagactatgataggcatagagatagg
gatgaaagtcatagacatagatctaaatcctatgatagagatagagaggaaagacgaaga
cacaggtccaagtcccatgacaaggatagagaggaaaggcacagccatagatctcactca
aggggaagatctgggcataagtcaaaatcaaggtctccatcacctactcaatctcggtcc
cgatctcgctctaaaagcaagagggtcagtggctttgacatggcaccttcaccttctgct
ctcctacctggtgccccaggactcgcaggtcagattcccgggactgcaccaaccattcct
ggaatatttccaaacatgttgactttggctcctggacagttgggagctctccctgttatg
ccagttcaggcgatgactcagcaggctactagacatgcacggcgagtttatgttggtgga
cttcctccaagtgctaatgaacagtcggtggcaatattctttaaccatgtcatgtctgcc
attggaggaaacacagctggtccaggtgacgcagtagtcaatgtttatattaatcatgag
aaaaagtttgcatttgttgagatgagatcagttgaagaggctagcaatgccatggcactc
gatggcattatctttgagggaactcaagttaaggtcagaagacctactgattataatcca
tctctggctgctactcttggtccaagtcaaccatgtccaaacctgaatcttgcagctgtt
gggttagctccaggatcttctggtgggcttgagggtcctgaccgtgtctttgtgggaggt
cttccctattatttcactgaaaatcagattcgggagctgcttgagtcttttgggccactt
agagggtttaatcttgttaaagatagggaaaccggaaattcaaaaggctatgccttctgt
gtttatcaggatgtttcagttactgatattgcttgtgcagctcttaatgggattaagatg
ggtgataaaactcttactgttagacgtgctagccaaggttcattacagcctaaaccagaa
caggagagtgtactattacatgctcaacagcaaatagcatttcagaggctcatgtttcaa
cctggtggattacccacgaaggtattatgcctatcaaatgtggttaatgaggatgagctt
aggggtgatgaagactatgaagatatattggaagatatgagaactgaatgtgggaaattt
ggtactttagtgaatcttgtaatccctcgcccacggcccgatggtgaacctacacctgga
gttggaaaggtatttttggagtatgcagatattgaaggttctactacagctcagcaaaaa
ttgaatggaagaaaatttggtggaaatgaagtggttgcagtgttctacccggagaacaag
ttctctcagggggagtacgaaggctaa

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