Ipomoea triloba (trilobed morning glory): 115999986
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Entry
115999986 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
115999986
04131 Membrane trafficking [BR:
itr04131
]
115999986
04121 Ubiquitin system [BR:
itr04121
]
115999986
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115999986
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
115999986
Membrane trafficking [BR:
itr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115999986
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115999986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
115999986
NCBI-ProteinID:
XP_031095831
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All DBs
Position
12:8864456..8868540
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AA seq
462 aa
AA seq
DB search
MLQIKLRKPSSESGGAAKPLPVDSITVACPDHLVLADLPVAKSLGLASSASISKAVGRKS
RRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDERIQKIQTIKLMEG
IFICAAPHCLKSFIKKNEFEAHIHGNHADLLHPNAEKDGNVSDTANARKPAASDSTVQAP
PRSAFSPTPGSQVHDREDKASHMPSKLTPPSAGQIQSHQTENQGDSNPPPGFERSGPQNQ
FPQETFETQGGMRQEPGQFQDKQQGVVGASPFPEYPINVPQPHGFMPVNPNPVLAPPQFG
YPHFVPDGAQPYYGAPYDMRRPDSAAEAGSEQGSLLGFPPGPAGAANYAEAYPRPWNMGQ
AVGPFDSSAVHGFMEGFMNAPDPQGRNTFFQGNSAGLPPNMPPASSSSANKGLETGQGYS
MDPRDGKSVLAPQPMPLPPPPPMPPHMHQLQRGRSYSGDTES
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagattaagctcagaaagccatccagtgaaagtgggggtgctgcaaagccctta
cccgtagatagcattactgttgcatgccctgatcaccttgtcttagctgatcttcctgta
gctaagagccttggtttggcaagtagtgcatccatttcaaaagctgttggccgcaaatcc
cgtcgtcagcttggggagcgagtgcatttttgtgttcgttgtgatttccctattgctatc
tatgggcgtctgagcccatgtgagcatgcattctgtttggattgtgcacggagtgattct
ctctgctacctctgtgatgaacgcattcagaagatacagacaataaaattgatggaaggg
attttcatctgtgcagctcctcactgtcttaagtcgttcataaagaagaatgagtttgag
gctcatattcatggaaaccatgctgacctcctccatccaaatgcagaaaaagatggaaat
gtgtcggacactgccaatgctagaaaacctgcagcctcagattcgactgttcaagcaccc
cctaggtctgccttttctcctactccaggttcccaggttcatgatcgcgaagacaaagct
agccatatgccatcaaagctcacaccaccttctgctgggcaaattcaaagtcatcaaaca
gagaatcagggtgatagtaatcctcccccaggttttgagaggtctggaccccagaatcag
tttcctcaggagactttcgagacacagggtgggatgaggcaagaaccgggccaatttcaa
gacaaacaacaaggagttgttggagcatctccttttcctgaataccctattaatgttcct
caacctcatggttttatgcctgttaatccaaatccagttttggccccccctcaatttggt
taccctcattttgtacctgatggagcccaaccatattatggtgctccgtatgatatgcga
aggccagactcagcagcagaagctggatcagagcaaggatcattactgggttttccacct
ggtcctgcaggggctgcaaattatgcagaagcttaccctcggccatggaatatggggcag
gctgttgggccttttgattcttctgcagttcatggatttatggaaggtttcatgaatgca
cctgatcctcaaggaagaaacacattctttcaaggaaattctgcaggattgcccccaaat
atgcctcctgcctcttcttcgtcagctaacaaaggattagaaaccggacagggatattcg
atggatccgagggatgggaagtctgttctggcaccacaacctatgcctctccctcctcct
ccccctatgccaccccatatgcaccagctccaaagaggcagatcctattctggtgataca
gagtcatga
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