Ipomoea triloba (trilobed morning glory): 116000119
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Entry
116000119 CDS
T07384
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116000119
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116000119
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
116000119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
SNRNP200_wHTH
ResIII
HHH_5
Cdd1
IMS_HHH_1
AAA_22
DNA_pol_lambd_f
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116000119
NCBI-ProteinID:
XP_031096007
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All DBs
Position
12:complement(5636957..5644897)
Genome browser
AA seq
1212 aa
AA seq
DB search
MDAYSLKSVQELPAMFRSVFSFRYFNSLQSECFPACFLSDVNMVISAPTGSGKTVLFELC
ILRLLSRFISTEGKFIHVKGSLKTVYVAPSKALVQEKLRDWNQKLGSWGINCLELTGDNE
YYNNKDIQDADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVLIDEVHLLNDPRGAALEA
VVSRIKMLSSISEMKLSPLAHVRFLAVSATIPNINDLAEWLMVPNQGIKKFGEEMRPVKL
TTKVFGYTPAKNDFLFEKRLQNYIFDILMQHSRGKSALVFCSTRKGAQETAQRLTQAAMK
FGHSNPFIKSREQQDRLREASLSCSDKQMQSYIPYGVGYHNGGLSMKDRNLIEGLFLNSD
LQVLCTTNTLAQGINLPAHTVIIKSTQHFNQEKGLYMEYDRSMILQMCGRAGRPQFDDAG
VVVIMTRKETVHLYENLLNGCELVESQLLPCITEHLTAQIVQLTVSDITKAIEWMKCSYL
YVRMKKNPENYAMTKLLASNNIERHLQEICVKKVNELSRYQMIWTDEDGFLLKPLEPAKL
MTKYYLKFDTMKHIMQASANCSIEDALHIICHAEEIAWIQLRRTEKKLLNDINNDKNNRL
RFHILGDKNKKKKRIQTREEKIFILANDCLTGDPLVHELSMTQDMNSICTNGCRIAKCMK
EYFVYKKNYIGALSSALLAKCLHQKVWDDSPYLLKQLPGIGMVTAKALNSMGVKSFEALA
DADPRKIEMVTGRKYPFGNHIKGSLLSLPPKIEMEVKETESQRQGKSKVVITLTRMSQPA
LMTKGYYADLVVGLGEGNLILFHEKIRVHDFPSPYSATVIVPNPQKRKLTVKADLIFDEF
IGVDIHQKVTVMKEMNQDISNKHKTRQNPSCQLKEAYIVEDNKDSTSEAPIEEPLNVDES
EGFFDMPSFTLIDEEPDKVVTAVGTEDDECKVITERTIFDHIREKAKSLPPLGMLGDTSF
TSLETLALIRKRTRERLLAVENPIEVDEGINKVARHSMTIQSARAHQLEKSLSDKDATSE
SHYISKDNNPTNDTGKLPSEPNSVQFVDLTKKPEFGHMQGSPILGRLKTTGSKLYTLGNQ
NWFSPQSSHTNSDFEGFKARKVNDVIVLDPEPVEQKQHEAIGVTKLRDNVCSGSAFSRSD
ITSQSSMVSSSPSCTSLPRNEVGDLRNSSETKCKQHISTPSLLERQRSSPAAVQDTREMN
CFLGFKSVFTFL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttattcgttaaagtccgtgcaagagttacctgctatgtttcgttcagttttc
agtttcaggtattttaactccttgcagagtgaatgctttcccgcttgtttcctctcagac
gtgaacatggttatatcggcacctactggaagtgggaaaacagtactttttgaactatgc
attttgaggcttctctcaaggttcatatccactgagggaaaatttatacatgtcaagggg
tctctgaagacagtctatgtggctccttcaaaagcattggtacaagagaagctacgggat
tggaaccaaaaacttggttcatggggaataaattgcctggagttgacaggggataatgaa
tactacaacaataaggatattcaggatgctgacataattcttacaactcctgagaagttt
gatgctgtgactcgatatcgcattaaagacggaggcctgagctttttcagtgacattgct
ctggtgcttattgatgaagtccatctgttgaacgatcctcgtggagcagctttggaggca
gtagttagcaggatcaaaatgctttcttccatttctgaaatgaaattaagtcctctagcc
catgttcgttttctagctgtatcagctacaattccaaatattaatgaccttgcggagtgg
cttatggttcctaaccaaggaattaaaaagtttggtgaagaaatgagaccagtaaagttg
acaaccaaagtgtttggctatactccagcaaaaaatgacttcctatttgaaaagcgcctt
cagaactacatatttgatattctcatgcaacattcaagaggcaaatctgcacttgtcttc
tgctcaaccagaaaaggagcacaagagactgcacaacgactcacgcaagcagcaatgaaa
tttgggcattcaaatcctttcatcaaaagcagagaacagcaagataggttgagagaagct
tcgctctcatgcagtgataaacaaatgcaatcttatattccttatggtgttggctaccac
aatggtggactttccatgaaggatcgcaaccttattgaaggcctctttctgaacagtgat
cttcaagttctatgcaccacaaatactcttgcccaaggaattaatctaccagcacataca
gttataatcaagtcaacacagcacttcaaccaggagaagggtctttacatggaatatgac
agatcaatgatcctgcagatgtgtggaagagcaggccgtccacaatttgatgatgcagga
gtggttgtaatcatgaccagaaaagaaactgtacacttgtatgagaacctactaaacgga
tgtgaactggtcgaatcacaattacttccatgcattacggagcacttaactgcacagatt
gttcaactgacagtgtcagatattacaaaggcaatcgaatggatgaaatgctcatatttg
tatgtgagaatgaaaaagaatcctgagaattatgcaatgacaaagctgctagccagtaac
aacatagaaaggcatctgcaagagatatgtgtcaagaaggtgaatgagttgtcacggtac
caaatgatctggactgatgaggatggtttcctcttaaagcctcttgagcctgcgaagtta
atgacaaaatactatctgaaatttgacacaatgaaacacattatgcaggcatctgcaaac
tgtagcatagaagatgcacttcatattatttgccatgctgaggagattgcttggatacaa
ctcaggcgcactgagaagaagcttttgaatgacataaacaatgataaaaataatcggctt
cgttttcacatcctcggggacaaaaataagaagaaaaaacggatccaaaccagagaagag
aagatatttattttagcaaatgactgcctgactggggatcctttagtgcatgagttatca
atgacccaggacatgaattctatatgcacaaatggatgcagaattgcaaagtgcatgaaa
gagtactttgtatacaagaaaaactacataggagctttgagttcagcacttcttgccaaa
tgtttgcatcaaaaagtatgggatgacagtccatacttactgaagcaattacctggcatt
ggaatggtcacagcaaaggcactgaattccatgggagtaaagtcttttgaggcccttgcc
gatgctgatccaagaaagattgagatggttactggtcgtaaatatccatttggaaaccat
ataaaagggtcattattatcacttccaccaaaaatagagatggaagtaaaggaaactgag
agccaaagacaaggtaagtccaaggttgtcataacattgacaaggatgtctcagcctgca
ttaatgactaaaggatactatgccgatctggtggttggcttgggagaaggtaacctgatt
ctatttcatgaaaagataagagtgcatgactttccaagcccatatagtgcaacagttata
gtgcccaaccctcagaaaaggaagctgactgtgaaagcagatctgatatttgatgaattc
attggtgttgatattcatcagaaggttacagtgatgaaggagatgaaccaggatattagt
aataaacacaaaacaagacagaatccctcctgtcaattgaaggaagcatatatcgtagaa
gataataaggattctacttctgaagctccaattgaagagccactcaatgtagatgaatct
gaaggtttttttgacatgccaagtttcacacttatagatgaagagccagacaaagttgta
actgctgttggcactgaagatgatgaatgcaaggtcatcactgaaagaactatatttgac
cacatacgtgaaaaagcgaagagcttacctcctttgggcatgttgggtgacacaagtttc
acttcactagagaccttggctcttattagaaagcgaactcgggagagactgcttgcagtt
gaaaatccaatagaagtagatgaaggaataaataaagttgcccgtcacagcatgaccatt
caatcggctagagctcatcaattagaaaaaagtttgtcagacaaagatgccacttcagaa
agtcactacatttctaaggacaataaccctacaaatgacacagggaaacttcctagtgaa
cccaattctgttcaattcgttgacctcaccaaaaaaccagaatttggacacatgcaagga
tcaccaattttagggaggttgaagaccactggatccaagctatatactttgggcaatcaa
aattggtttagccctcagtctagtcacacaaattctgattttgagggttttaaagctaga
aaagtaaatgatgtgattgttttggatcctgaacctgtggagcaaaaacagcatgaagct
ataggagtcacaaagttgagggataatgtgtgttctggcagtgcattcagtagaagtgac
ataacttctcagtcttcaatggtgtcatcatctccctcttgtacatctttgccaaggaac
gaagtaggtgatttgagaaactcttcagaaaccaaatgtaagcagcatatatcgactcca
agtttattggaaaggcagcgctcttccccagcagcggtgcaagacacccgggaaatgaac
tgcttcttgggttttaagagtgtgtttacatttctctaa
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