Ipomoea triloba (trilobed morning glory): 116000297
Help
Entry
116000297 CDS
T07384
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116000297
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
itr01009
]
116000297
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116000297
Protein phosphatases and associated proteins [BR:
itr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116000297
Spliceosome [BR:
itr03041
]
Common components
Common spliceosomal components
SR proteins
116000297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116000297
NCBI-ProteinID:
XP_031096226
LinkDB
All DBs
Position
12:21842708..21848646
Genome browser
AA seq
196 aa
AA seq
DB search
MGYTRVERPASPPKSPSPVKGRRSRSRSRSLSASRRSRSRSRDAEVATNPGNNLYVTGLS
TRVTSSDLEKFFSSEGKVVECHLVTDPRTKESRGFGFVTMETNEAADRCVKYLNRSVLEG
RLVTVEKAKRKRGRTPTPGRYQGVRNTRGSDRRRSRSYSPRRRHDRDSYYGDRRGRSRSP
YNRRDDDHGSYRRHRD
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgggttataccagagttgagaggcctgcttcaccgcccaagtcgccatccccagttaaa
ggtcgtaggtctaggtcgagatcgagatcattatcagcctcgaggagaagccgctcaagg
agccgtgatgctgaagttgctaccaatcctggaaacaacctgtatgtgactggcctatca
acaagggttacaagcagtgatcttgagaagttctttagcagtgaagggaaggttgttgag
tgccatctcgttacagatcctcgaacgaaagagtctcgtgggtttggttttgttacgatg
gagacaaatgaagctgcagatcgatgtgttaagtatctaaaccgctctgtgctggagggt
cggcttgttactgttgagaaggctaagagaaaacgaggtcggacaccaactcctggaaga
tatcaaggtgtgagaaatacacgaggatctgatcgaagacgatctcgtagctactcaccc
cgccgacggcacgacagggattcatattatggggaccgacgaggaaggtcacggtcgcca
tataataggagggatgatgaccatggttcctatagaaggcaccgggactaa
DBGET
integrated database retrieval system
