Ipomoea triloba (trilobed morning glory): 116000853
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Entry
116000853 CDS
T07384
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116000853
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116000853
Surveillance factors
Other surveillance factors
116000853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
116000853
NCBI-ProteinID:
XP_031096564
LinkDB
All DBs
Position
13:27279479..27286792
Genome browser
AA seq
1531 aa
AA seq
DB search
MAEGKLDLPDDLLSSRSSDQTWIPKASAGSDEDKSFTGGVLDLSKDQAVHDSSIPLSPQW
LYAKPIDTKTDMRTPSSLSLGSSADSSQKEAWRTDAPEDKKDWRRTTAETESRRWREEER
ETGSLARRDRRKPDRRAVENASAKETTENRALPTSDRWHDGGNRNAGLDARRDSKWSSRW
GPEEKEKEARTEKKIDTEKEDANSDTQTFVASRSVSERDPDARDKWRPRHRLEGTTAVPG
SYRTAPGFGIEKGRAEGSYVGFVIGRGRSSTSIQRPSSGGIGAALSESDKSVLGKPVTAA
NTFCYPRGKLLDIYRKQRIDSSFANVYENMEEAPPITLETVIEPLSLVVPDADEEAILND
ICTGKITSSGALYNSYRKGRSTDNITEIEDMEPSNGKVSPLSTGTMEKKVDIIPNLSKDI
HESAVDNNAIETNLHEIEGKNRVPEVVAGDDILSTLIRDEYINRSVDIGTQFEASELIPS
HRAKTTASDGIGSKLSNDSNSLIGMPSSAQYLGRNTIENQLKRGIPPEELSMFYCDPQGE
IQGPFLGVDIISWFEQGFFGSDLPVRLVDAPEDSPFEELGDVMPHLRVRDGYGGVSDPSS
KLEQPATPEGALIADIHDSASTVIGSSAARDGLIWQPSDFSGPYSPHIQSKVSDHEFLQS
KKSFSRGNNFNDFYAQDEEIVFPGRPGSGGNPIGRTSGTTSDPSSIINGSSIPNELSEHG
IAVQRDNKLHPFGLLWSELEGPFARNDSRAGQDQLVNPISGRDSSFGTMSESTVSMEARP
DAYKSNVHSDQNPYQGAMDVRHLSRMDQESNCYDLADKLLSQQLQQQHLPPHSLMSHNAH
MNDAMMERVGTQNSIHSPHLASQMGQDLEQFIALQAQQQRQLQFQQLQQQQQYHQQQMLL
KEQQQSQAREQLLLEQILRNQMLDSNPGQSHVDAMIANSALEQVLLKQKILSELQQRPHL
PTRQADPSIEHLIQARFGQMPHQEHQNDLLELLSRAKHGQMHPLEHQIIQHEQLHGRQLP
MGLRRQRMEMEEDRQTPFWPINEPGQFLRNPPGAHRASSGVGPLDLFQKQQILSPEDHIG
LLERNLPLQDRRPQRGRYDPGLNPFERSMSLPGGGVNLDVVNTMARAQGLHVQDPNVQMH
SGGNVGGFSGVYHHQSLVPNAFHGSHSDSVEGQWSESNGQLPTDWIESHVQRLHLTGERQ
MKESEMKRSSDDSSLWMSAGGNDESSRRLLMELLHQKSDQQSIHRSENLVGTSYERGLAS
AHTSGTNTVNYNFNSVSDQEMGLSQSLVGPSSSNLEIASEKFSFNSLSGSLVEEPFLSGI
NDKASLANIDQGEVPVSVLRRNTSLSTGGLYSDDIRTGGAPVEDVNKDRTSAATSRGPEN
ILLKRPPVLRVLSNQEGLSEMNVDRLVRGRSPSNVVACEVEKRDGGANALNQVSDAGATG
KKDTSFRRTASFGDGEVTETSFSDMLKSTAKKASLEVHSSTAASESSSDAAQGGRSNKKK
GKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggaaagctcgatctccccgacgacctcctctcgtcaaggtcctccgatcag
acttggattccgaaagcttctgcaggtagcgacgaggacaagtccttcacaggaggagtg
cttgatttgtctaaggatcaagcagtgcatgatagcagcattccattgtctccacagtgg
ctttatgctaaaccaattgacactaagacagacatgcgtactcctagttcattgtccctc
ggaagttctgcagattcaagtcagaaggaggcctggcgtacagatgctcctgaggataaa
aaggattggaggaggaccacagcagagactgagagtcgtcgttggcgtgaggaagagagg
gaaactggttcacttgctagaagggatcgtaggaaaccagatcgccgtgctgttgagaat
gcttctgccaaagaaacaactgaaaacagagctttgcctacttctgacaggtggcatgat
ggtggtaatcgcaatgcaggtcttgatgcaaggcgtgatagcaagtggtcttctaggtgg
ggtcctgaagaaaaagagaaggaagctcgcacagagaaaaagattgacactgagaaggaa
gatgctaatagtgacactcaaactttcgttgctagccgctctgtttcagagcgggaccca
gatgcccgtgataagtggcgaccacgccacaggctggagggaactactgctgtccctggt
tcatatcgtactgctcctggatttgggattgagaaaggacgtgctgaaggttcatatgtg
gggtttgtcatagggcgtgggagatctagcacgtctattcaaagaccgtcaagtggtgga
attggtgctgcactatctgagagtgataaaagtgttcttggaaaaccagtcactgctgcc
aataccttttgctatccaaggggtaaactgcttgatatttatcgcaagcagaggattgac
tcttcttttgctaatgtttatgagaatatggaagaagcacctccaatcacactagaaact
gtcattgaacccttatctttggttgttcctgatgctgatgaggaggccattcttaatgat
atatgcactggaaaaatcacgagtagtggggctttatataattcttataggaagggcaga
tcaactgataacattactgaaattgaagacatggaaccttccaatggaaaagtgtcaccc
ctctctacaggtacaatggaaaagaaggtggatatcattcctaacttatcaaaagatatt
cacgaatcagctgttgacaacaacgctattgagacaaatttgcacgagatagaaggaaaa
aacagagttcctgaagttgttgctggagatgatattttgtcaaccttgataagagatgag
tatataaacagatcggtagatattgggactcaatttgaggcttctgaactcattccttct
catcgtgccaaaacaactgcttctgatggcattggttctaagctttctaatgattcaaat
tcccttattggtatgccatcttcagcacaatacctgggacgcaacactattgaaaaccaa
ttaaagaggggcattccacctgaggagttaagtatgttctattgtgatcctcaaggagag
atccagggcccatttcttggtgttgacatcatttcttggttcgaacaaggattttttgga
tcagatttgccagttcgtttggtagatgcccctgaagattcaccttttgaagaactgggt
gatgttatgccccacttaagagttagagatggttatggtggtgtctctgatccaagttct
aaattagaacaacctgcaacaccagagggtgcattgatagctgatatacatgattctgca
tctactgtaattggttcttcagctgctcgtgatggcttgatctggcaaccatcggatttc
tctggtccttattccccgcatattcagtcaaaagtatctgatcatgaatttcttcagtca
aaaaaatcattttccaggggcaataacttcaatgatttttatgctcaagatgaagaaatt
gttttcccaggaaggcctggaagtggtggtaatcctattggcagaacatcagggaccacc
agtgatccttcaagtattataaatggttcatcaataccaaatgaattgtctgagcatggg
attgcagttcagagagataataagttgcatccatttggtctgctatggtctgagcttgaa
ggcccttttgcaaggaatgatagtagagctggtcaggatcaacttgtaaaccccatttct
ggaagggattcctcatttggcacaatgagtgaatcaactgtttctatggaggccaggcct
gatgcttacaaaagcaatgtacactcagatcaaaatccatatcaaggtgctatggatgtt
cggcatttgtcacggatggaccaggagtcaaactgctatgatttggctgataagctgctg
tctcaacaactccaacaacagcatcttcctccacatagtttgatgtctcataatgcccac
atgaatgatgcaatgatggaaagagtggggactcagaattcaatacacagtccacatctt
gccagtcaaatggggcaagatctggaacagttcattgctcttcaagcacaacagcaaaga
caattgcaatttcaacaactgcagcagcaacaacagtaccatcagcagcaaatgctcctg
aaagaacagcaacaatctcaggcgagggagcagctgcttcttgaacaaatattgcggaat
caaatgcttgattccaatcctgggcaatcacatgttgatgctatgatagccaatagcgct
cttgaacaggttttgttgaagcagaaaattttaagtgagctacaacagcgccctcatctg
cctacacggcaagctgacccttccattgagcatcttattcaagcaaggtttggtcaaatg
ccacatcaagagcatcaaaatgatttgttggagctcttatccagagcaaaacatggacag
atgcatccattggagcatcagatcattcagcatgaacagctgcatggtaggcagttaccg
atggggttgaggaggcaacggatggaaatggaggaagacaggcaaactcctttctggcca
attaatgaacctggtcagtttcttagaaatcctcctggtgctcaccgtgccagctctgga
gttgggccattagatctttttcagaagcaacagatactttctcctgaagatcacattggt
ctcctcgagcggaatcttccattacaagatagaaggcctcaacgcgggcgttatgatcca
gggttaaatccatttgagcgatcaatgtcattgcctggaggtggagttaatctagatgtt
gtaaatacaatggcacgtgcacagggtttacatgttcaagaccctaatgtgcaaatgcac
tctggtggtaatgtaggtgggttctctggtgtctaccaccatcagtcattggttcccaat
gcatttcatggttctcattcagattcagtggagggccaatggtccgaaagcaatggtcag
ttaccaactgattggatagaatcccatgttcagcgattgcatcttactggtgagaggcaa
atgaaggagtcagagatgaaaaggagttctgatgattcaagtttatggatgtctgcagga
ggaaatgatgaaagttcaaggcgtttgcttatggaactgcttcaccagaaatctgatcag
cagtcaattcaccgttcagaaaatttggttggaacttcctatgaaaggggtctagcttca
gcacatacttctgggactaatactgtaaattataacttcaattctgtgtctgatcaagaa
atggggctaagccaatctctcgtagggcctagtagttctaatttagagattgctagtgaa
aaattttccttcaattctctttctggatcattagttgaagaaccattcctctctggcata
aatgataaggccagtttggcaaatatagatcaaggggaagtcccagttagtgttctgaga
aggaatacttcgctcagcactggaggcttgtacagtgatgacattcgtactggtggtgcc
ccggtagaggatgtaaataaggatcgtacatctgctgctacatcaagaggtccagaaaac
attttgctaaaacgtccgcctgttttgcgagttttatcaaatcaagaaggtttatctgag
atgaacgttgatcggcttgtcagagggagaagtccttccaatgtagtagcttgtgaagtg
gaaaaacgggatggaggagctaatgcattaaatcaagtctccgatgctggtgcaactggg
aaaaaagacacaagttttcgccgaactgcatcttttggtgatggagaagttacagagaca
tcattcagtgacatgcttaagagtactgcaaagaaggcctccctggaggttcattcttca
acagctgcttctgagtcgtcatcagatgcagcccagggtggtcgaagcaacaaaaagaaa
gggaagaaagggagacagatcgacccagctcttcttggattcaaggtcaccagcaatcgc
ataatgatgggtgagatacagcgcatagaggactag
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integrated database retrieval system
