Ipomoea triloba (trilobed morning glory): 116001017
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Entry
116001017 CDS
T07384
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116001017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116001017
Spliceosome [BR:
itr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
116001017
Complex B
116001017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
116001017
NCBI-ProteinID:
XP_031096782
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All DBs
Position
1:complement(15428584..15439095)
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AA seq
217 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQKFEEQQTQALIDQRIKERLGQ
AAAYQQIGVAYNQHLAAFPGQPPRMPILPPPLLPIPGAPPPQLVPGVRLPVFPRPLPGAP
AYSVPPIAPVPGQPPGAPPLPMQPGMPNPNSAPPVPGGATPTSSSSAPTAAMQAMYQPNP
AASAAPATNTPGGSYAFAPPPAPAPAPAPASAPETSQ
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtactattgtgactactgcgatacttacttgactcatgattccccttcagtc
agaaaacagcataatgctggctacaaacacaaggcaaatgtacggtcttattatcaaaag
tttgaagaacagcaaacacaggctttgatagatcaaaggattaaagagcgtcttgggcag
gcagcagcataccaacaaattggtgtcgcatataatcagcatcttgctgctttccctgga
caaccaccacgtatgcctatcttgccacctcctttgctgcctattcctggagctccgcct
ccacagttagtcccaggagtaaggcttcccgtatttcctagacctcttcctggtgctcca
gcttattcagtgcctccgattgcaccagttccaggacaacccccaggtgcacctcctttg
cccatgcaaccaggtatgccaaatccaaattctgctccaccagttcctggcggagcaact
ccaactagttcaagcagtgctcccactgctgctatgcaagcaatgtaccagcccaatcct
gctgcaagtgctgccccagctactaacaccccgggtggtagctacgcctttgcaccaccc
cctgcccctgctcctgctcctgctcctgcttcagctcctgagactagtcagtag
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