Ipomoea triloba (trilobed morning glory): 116001632
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Entry
116001632 CDS
T07384
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03030
DNA replication
itr03410
Base excision repair
itr03420
Nucleotide excision repair
itr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116001632
03410 Base excision repair
116001632
03420 Nucleotide excision repair
116001632
03430 Mismatch repair
116001632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116001632
03036 Chromosome and associated proteins [BR:
itr03036
]
116001632
03400 DNA repair and recombination proteins [BR:
itr03400
]
116001632
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116001632
DNA Replication Termination Factors
ELG1-RFC complex
116001632
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116001632
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116001632
Check point factors
HRAD17(Rad24)-RFC complex
116001632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RuvB_N
RCF1-5-like_lid
AAA_11
AAA_5
AAA_19
AAA_24
AAA_assoc_2
AAA_25
nSTAND3
AAA_28
AAA_30
DNAX_ATPase_lid
MeaB
ABC_tran
AAA_18
bpMoxR
IstB_IS21
AAA_3
NTPase_1
RNA_helicase
DO-GTPase1
Rotavirus_VP3
Motif
Other DBs
NCBI-GeneID:
116001632
NCBI-ProteinID:
XP_031097384
LinkDB
All DBs
Position
13:5971943..5975048
Genome browser
AA seq
331 aa
AA seq
DB search
MASSSSVASGPDIPWVEKYRPSKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT
TSILALAHELLGPNLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTTGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFGRLSDQEILGRLM
VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFGFINQENVFKVCDQPHPLHV
KNMVRNVLEGKFDDACVGLKALYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQLCGLLAKLALARETAKAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcttcttctgttgcatcaggccctgacatcccatgggtcgagaagtacagg
cccagcaaggtggccgacatcgtcggcaacgaagacgccgtcgccaggctccaagtcatc
gcccgtgacggaaacatgcccaatctcattttagctggtcctcctggcactggtaaaact
accagtatacttgctcttgctcatgaacttctggggccaaatttgaaggaagcagttctg
gagctaaatgcatcagatgatagggggattgatgttgtcagaaacaagattaagatgttt
gctcagaagaaagtcacgcttccccctggccgccataagattataattttggatgaagct
gacagcatgacaactggagctcaacaagccttaaggaggacgatggaaatatattctaac
tctactcgctttggtcttgcctgcaacacttcttctaaaatcattgagcctatccagagt
agatgtgccctagtccggtttggcagattatctgatcaagagatccttggacgacttatg
gtagtggttgctgcagaaaaggttccttatgtaccagaaggtcttgaggcaatcatattt
actgctgatggagacatgagacaggctttaaataacctgcaagcaacatacagtggattt
gggttcatcaaccaagaaaatgttttcaaggtatgtgaccaaccccatccccttcatgtg
aagaatatggtacgcaatgtacttgaagggaaatttgatgatgcttgtgtgggtttaaag
gcactatatgacctgggctattctcccactgacattattacaacccttttccggattata
aagaactatgatatggcagaatacctgaaattggaattcatgaaggaaactggatttgca
catatgaggatctgcgatggagtgggatcgtatcttcagctatgcggtctgctagcgaaa
cttgcattggctcgggagactgcaaaggcagcatga
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integrated database retrieval system
