Ipomoea triloba (trilobed morning glory): 116001752
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Entry
116001752 CDS
T07384
Name
(RefSeq) RNA-binding protein Y14A-like
KO
K12876
RNA-binding protein 8A
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
itr03015
mRNA surveillance pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116001752
09122 Translation
03013 Nucleocytoplasmic transport
116001752
03015 mRNA surveillance pathway
116001752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116001752
03041 Spliceosome [BR:
itr03041
]
116001752
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116001752
Spliceosome [BR:
itr03041
]
Complex C
Other components
EJC/TREX
116001752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Pox_Ag35
RRM_7
Motif
Other DBs
NCBI-GeneID:
116001752
NCBI-ProteinID:
XP_031097548
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All DBs
Position
13:complement(21788009..21791861)
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AA seq
195 aa
AA seq
DB search
MANAEAETVDFEPEDDDLMDEDVDTPSSPRAPTPRIKSLVTGGSSSAPRKTKGRGFREDA
AEADRNVRMSARFDSLDSDGGPGPERSIEGWIVLVTGVHEEAQEDDLHNAFGEFGEIRNL
HLNLDRRTGFVKGYALIEYENIEEAQKAIAEMEGTQLLTQTINVDWAFSKGPFRRRNVRR
RSPRSHRSRSPRRRY
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcagaggctgagacggtggacttcgagccggaggatgacgatctgatggac
gaggatgtggacacgccatcgtcccctagggctccgactcccaggatcaagtcgcttgtt
accggcggctcctcctctgctcccagaaagaccaaaggccgcggatttcgcgaagacgct
gctgaggccgaccggaatgttcggatgtctgcgcgctttgactctctcgattccgacggc
ggccctggtcccgaacgatcaattgaaggatggattgtgttggttactggggttcatgaa
gaggcacaagaagatgatctccataatgcatttggtgaatttggggagattagaaattta
catctaaatctggatcgtcgtactggatttgtcaagggctatgcactgattgaatatgag
aatattgaagaagcacagaaagctatagctgagatggaaggaactcaactcctcactcaa
accattaatgttgattgggcatttagcaagggtccattcaggaggaggaatgttaggcga
agatcccctcgaagtcatcgttctagaagcccgagaaggagatactag
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integrated database retrieval system
