KEGG   Ipomoea triloba (trilobed morning glory): 116001842
Entry
116001842         CDS       T07384                                 
Name
(RefSeq) DNA repair protein RAD5B-like
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:itr03400]
    116001842
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    116001842
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C UBA_RAD5A HIRAN DEAD zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 ResIII zf-RING_2 zf-C3HC4_2 zf-RING_5 Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 zf-ANAPC11
Other DBs
NCBI-GeneID: 116001842
NCBI-ProteinID: XP_031097650
LinkDB
Position
13:25291835..25297342
AA seq 1146 aa
MYSCCSFLQKFISCLKGFFFSRNSAAMEIEMESEKEINLIRSVVGSRVSEPDILKALSCC
NNSAAAAINYILDNPLPPDVKKTVTSTGARISGPVKQEIGEEELKGSDYPEKGAKKEPGW
YGEYYKWLDEQDTEKVKKEGELKVKTEPYVGDDSKAIVIAEPILESDIKPRVKAEPILES
DIKPIVFAEPVLESDIKPRVKAEPISSSFVKEEKGGEVLSVQPLSARPVTGEYAERFLSW
RPGRKTEKKVDMTLSTVVIEDGDFPEEADWMLVGRNVVTGLSTTKGRKIENNEIVHFAFP
KAVSSRYSKVTSSIVRFSTKRFGEIGRLPMEWGNCLIPLVNSKKVKVLGRCVAAPANLQL
MQEIMLYVSFYIHSSVFKDGDKSSWRIDCPSEIETTIYPLLTLFKLLKINPFQKAEFKPD
DFDSRKRPLDLEGDSVGVVAKRIKGCIEQNKTEQGLSESTLNKLVGAAEMYDLKEIEPPE
TLVCSLRPYQKQALYWMSELEKGTEAEQTAKVLHPCWAAYRICDERGPAIYVNIFSGEAT
AEFPSALETARGGILADAMGLGKTVMTIALILARPGKGIPDNQELAEPITQHYRNRRIKG
GTLIVCPMALLGQWKDELEAHSKPDSISVFVHYGGDRSDDPRVIAEPDVVLTTYGLLTAA
FKADEDNSIFHKVDWHRIVLDEAHTIKSWKTMSARAAFKLSAHCRWCLTGTPIQNNLQDL
YSLLCFLHVEPWCNWAWWNKLIQRPYENGDQRALKLIKAILRPLMLRRTKETKDKEGRPI
LVLPPTDIQIIECEQSEAERDFYDALYKRSKVQFDEFVAQGKILHNFANILELLLRLRQC
CNHPFLVMSRGDTDKYANLNKLAKKFLDTNPDLDKVAETNPDSASQKVPTRAFVEEVVEE
IRKGENTECPICLESADDPVLTPCAHTMCRECLLSSWRNPSCGMCPMCRRLLNRSELITS
PSANKFRIDVQKDWKESSKVTKLMDCLQRIRESGSGEKSIVFSQWTLFLDLLEIPLRKSG
IGFLRFDGKTQQKQREKVLHEFSETTEKMVLLMSLRAGGVGLNLTAASNVFLMDPWWNPA
VEEQAIMRIHRIGQKRTVCVRRFIVKETVEERMQQVQARKQKMIAGALTDDEVRSARIEE
LKMLFR
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgtattcttgttgttcattccttcaaaaattcatctcttgtttgaagggtttcttcttc
tctcgcaattctgcggccatggaaatcgagatggaaagcgagaaggaaatcaacttgatc
agatcagtcgtgggttcccgggtctcggaacccgacattctcaaagccctatcttgctgc
aacaacagcgccgccgccgccataaactacattctcgacaatcctttgcctccggacgta
aaaaagacggttacatccaccggcgcccggatttccggcccggtgaaacaggaaataggc
gaagaagagttgaaaggatcggactatcccgagaagggcgcaaagaaagagcctggctgg
tacggcgagtactacaagtggctcgatgaacaggacacagagaaggtgaaaaaggaaggt
gagttgaaagttaagacggagccttatgtaggagatgatagcaaggctatagtgatagct
gaacctattttggaatctgatatcaaacctagagtgaaagctgaacctattttggaatct
gatatcaaacctatagtgtttgctgaacctgttttggaatctgatatcaaacctagagtg
aaagctgaacctatttcttcaagttttgtgaaagaagagaaaggaggagaggtgctctct
gtgcagccattgtctgcaaggcctgtgacgggggaatatgcggagagattcctgtcttgg
cgtccaggtaggaagaccgagaagaaagtggatatgactcttagtactgttgtgattgag
gatggggattttcctgaagaggcggattggatgttggttgggaggaatgttgtcaccggg
ctttcgactacaaaagggaggaaaattgagaacaatgagattgttcactttgcttttcct
aaggctgtttcaagtaggtattcaaaagttacttcatctattgtcaggttttcaaccaaa
cgattcggagagattgggcgccttccaatggaatgggggaactgccttattccacttgtg
aattcaaaaaaggtaaaggttttaggtagatgtgtggccgcgcctgctaatcttcaactg
atgcaagaaattatgttatatgtcagtttctacattcatagctcagtgtttaaggatggt
gataagtcatcttggaggatagactgcccttcagaaattgaaaccacaatatatccactt
ctaactctgttcaagttactgaaaatcaatccttttcagaaggctgagtttaaaccagat
gattttgattctcgcaaacgccccctggacttagaaggtgattcagtaggagttgtggca
aaacggataaagggttgcattgagcagaacaaaactgaacagggtttatcagaatcaact
ttaaacaaacttgttggtgctgcagagatgtatgatctcaaggagatagagccacctgaa
acacttgtgtgtagcctaaggccctaccagaagcaggctctttactggatgtctgaattg
gagaagggaactgaagcggagcaaacagccaaagttttgcatccatgttgggcagcatat
cgaatttgtgatgagaggggtcctgcaatttatgtgaacattttctctggtgaagcaact
gcagaatttccttctgcattggaaacagcaagagggggaatcttagcagatgctatgggc
ctggggaaaactgtaatgacaattgctttaatacttgcaaggccgggcaagggtatcccc
gataatcaagaacttgctgagcctattactcagcattataggaacagaaggattaaaggt
ggcactctcattgtttgtcctatggcattacttggtcaatggaaggatgaacttgaagcc
cattcaaagccagatagcatttctgtttttgttcattatggcggggacagaagtgatgac
cctagagtgatagcagaaccagatgtggtcttgacaacctatggtcttctaactgctgca
tttaaggctgatgaggacaatagcatattccataaagttgattggcatcgaattgtactg
gatgaagcacacaccataaagtcctggaaaactatgagtgctagggctgcattcaaattg
tctgcacattgcaggtggtgtctcactggtactccaattcagaataatctgcaagatctt
tacagccttctgtgtttcttgcatgttgagccatggtgcaattgggcatggtggaataag
ttaatacagagaccttatgagaacggtgatcagagagcattgaaactgatcaaggcaatt
cttaggccattaatgcttaggagaacaaaggaaacgaaggacaaggaagggaggccaatt
cttgttctgccaccaactgacatccaaatcattgagtgtgaacagtctgaagcagagcgc
gatttctatgatgccctctacaagagatctaaagtccagtttgatgaatttgtagcacaa
ggcaaaattcttcacaactttgcaaacattcttgagttgctactcagactgagacagtgt
tgcaaccatccttttctagtgatgagccggggcgatacagacaaatatgcaaacctgaac
aagcttgccaagaagtttcttgatacaaaccctgatttggacaaggttgccgaaacaaac
cctgattctgcctctcagaaggtgcccactcgagcatttgttgaagaggttgttgaggaa
attcgtaaaggcgaaaacacagagtgtcccatatgcctagagtctgcagatgaccctgtg
ctcacaccttgtgcacacacaatgtgcagagaatgtctgttatcaagctggcgaaatcca
tcttgtggaatgtgtccaatgtgtcgtcgattgttaaatagaagcgagctgatcacttcc
ccttcagcaaataagttcagaattgatgttcagaaggactggaaggagtcttcaaaggtc
acaaaactgatggattgcctgcaacgtatacgtgaatcagggtctggtgaaaaaagcatt
gtttttagccaatggactttgttcctggatctcctagagatccctctcagaaaaagtggg
attgggtttttaagatttgatggaaaaacccaacagaaacaaagagaaaaggttttgcat
gagttcagtgagactactgagaaaatggttttgcttatgtctctgagagctgggggcgtt
ggcttgaatctcacagcagcctccaatgtgtttcttatggatccatggtggaatcctgcg
gttgaagagcaggcaatcatgagaattcatcggattggtcagaaacgtacagtttgtgtt
agaagattcatcgttaaggaaacagtggaagaaaggatgcagcaagttcaagctagaaaa
cagaagatgatcgccggagccctgactgacgatgaagtccggtcggcgagaatcgaagag
ctcaagatgcttttccgatga

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